Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 AL353708.3-201ENST00000610272 989 ntBASIC17.47■□□□□ 0.39
SLC1A3P43003 AL445675.2-201ENST00000620291 557 ntBASIC17.47■□□□□ 0.39
SLC1A3P43003 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.47■□□□□ 0.39
SLC1A3P43003 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC1A3P43003 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC1A3P43003 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC1A3P43003 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC1A3P43003 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC1A3P43003 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC1A3P43003 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC1A3P43003 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC1A3P43003 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SLC1A3P43003 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC1A3P43003 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC1A3P43003 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SLC1A3P43003 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC1A3P43003 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC1A3P43003 HTR7P1-201ENST00000538670 1336 ntBASIC17.47■□□□□ 0.39
SLC1A3P43003 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC1A3P43003 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC1A3P43003 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC1A3P43003 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
SLC1A3P43003 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC1A3P43003 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC1A3P43003 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC1A3P43003 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SLC1A3P43003 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC1A3P43003 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.46■□□□□ 0.39
SLC1A3P43003 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC1A3P43003 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC1A3P43003 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SLC1A3P43003 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC1A3P43003 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC1A3P43003 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SLC1A3P43003 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC1A3P43003 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC1A3P43003 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC1A3P43003 AL353807.1-201ENST00000427475 662 ntBASIC17.46■□□□□ 0.39
SLC1A3P43003 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.46■□□□□ 0.39
SLC1A3P43003 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SLC1A3P43003 AP002982.1-201ENST00000492365 877 ntBASIC17.46■□□□□ 0.39
SLC1A3P43003 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SLC1A3P43003 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC1A3P43003 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.46■□□□□ 0.39
SLC1A3P43003 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC1A3P43003 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SLC1A3P43003 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC1A3P43003 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC1A3P43003 AL359736.2-201ENST00000621992 437 ntBASIC17.46■□□□□ 0.39
SLC1A3P43003 FAM197Y4-202ENST00000622692 608 ntBASIC17.46■□□□□ 0.39
SLC1A3P43003 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC1A3P43003 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SLC1A3P43003 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC1A3P43003 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC1A3P43003 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SLC1A3P43003 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
SLC1A3P43003 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC1A3P43003 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC1A3P43003 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC1A3P43003 AC020763.4-201ENST00000623414 4170 ntBASIC17.46■□□□□ 0.38
SLC1A3P43003 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.46■□□□□ 0.38
SLC1A3P43003 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
SLC1A3P43003 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
SLC1A3P43003 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A3P43003 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A3P43003 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A3P43003 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SLC1A3P43003 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC1A3P43003 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A3P43003 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC1A3P43003 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A3P43003 AL049812.1-201ENST00000432563 2267 ntBASIC17.45■□□□□ 0.38
SLC1A3P43003 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A3P43003 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SLC1A3P43003 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A3P43003 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A3P43003 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC1A3P43003 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A3P43003 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A3P43003 PRORSD1P-201ENST00000295112 541 ntBASIC17.45■□□□□ 0.38
SLC1A3P43003 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A3P43003 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A3P43003 NIFKP9-201ENST00000419265 221 ntBASIC17.45■□□□□ 0.38
SLC1A3P43003 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A3P43003 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.45■□□□□ 0.38
SLC1A3P43003 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC1A3P43003 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.45■□□□□ 0.38
SLC1A3P43003 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC1A3P43003 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A3P43003 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC1A3P43003 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A3P43003 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A3P43003 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SLC1A3P43003 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A3P43003 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A3P43003 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC1A3P43003 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A3P43003 AC006333.2-201ENST00000607957 2099 ntBASIC17.44■□□□□ 0.38
SLC1A3P43003 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.44■□□□□ 0.38
SLC1A3P43003 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms