Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.23■□□□□ 0.67
HADHAP40939 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HADHAP40939 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HADHAP40939 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HADHAP40939 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HADHAP40939 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HADHAP40939 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.22■□□□□ 0.67
HADHAP40939 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HADHAP40939 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HADHAP40939 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
HADHAP40939 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HADHAP40939 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HADHAP40939 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HADHAP40939 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HADHAP40939 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.22■□□□□ 0.67
HADHAP40939 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.22■□□□□ 0.67
HADHAP40939 AC093827.2-201ENST00000512654 315 ntBASIC19.22■□□□□ 0.67
HADHAP40939 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.22■□□□□ 0.67
HADHAP40939 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.22■□□□□ 0.67
HADHAP40939 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.22■□□□□ 0.67
HADHAP40939 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HADHAP40939 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HADHAP40939 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HADHAP40939 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.22■□□□□ 0.67
HADHAP40939 AC073195.1-201ENST00000607241 877 ntBASIC19.22■□□□□ 0.67
HADHAP40939 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HADHAP40939 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HADHAP40939 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HADHAP40939 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HADHAP40939 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HADHAP40939 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HADHAP40939 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.22■□□□□ 0.67
HADHAP40939 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.22■□□□□ 0.67
HADHAP40939 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
HADHAP40939 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
HADHAP40939 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
HADHAP40939 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HADHAP40939 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HADHAP40939 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
HADHAP40939 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HADHAP40939 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
HADHAP40939 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.21■□□□□ 0.67
HADHAP40939 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
HADHAP40939 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HADHAP40939 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HADHAP40939 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
HADHAP40939 KRT16P1-201ENST00000399124 1418 ntBASIC19.21■□□□□ 0.67
HADHAP40939 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.21■□□□□ 0.67
HADHAP40939 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
HADHAP40939 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HADHAP40939 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HADHAP40939 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.21■□□□□ 0.67
HADHAP40939 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.21■□□□□ 0.67
HADHAP40939 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HADHAP40939 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HADHAP40939 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.21■□□□□ 0.67
HADHAP40939 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.21■□□□□ 0.67
HADHAP40939 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.21■□□□□ 0.67
HADHAP40939 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.21■□□□□ 0.67
HADHAP40939 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HADHAP40939 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HADHAP40939 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HADHAP40939 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
HADHAP40939 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HADHAP40939 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.21■□□□□ 0.67
HADHAP40939 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HADHAP40939 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.2■□□□□ 0.66
HADHAP40939 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HADHAP40939 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HADHAP40939 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HADHAP40939 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
HADHAP40939 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HADHAP40939 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HADHAP40939 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HADHAP40939 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HADHAP40939 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HADHAP40939 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HADHAP40939 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.2■□□□□ 0.66
HADHAP40939 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HADHAP40939 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HADHAP40939 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.2■□□□□ 0.66
HADHAP40939 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HADHAP40939 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HADHAP40939 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HADHAP40939 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HADHAP40939 FP475955.4-201ENST00000623131 1990 ntBASIC19.2■□□□□ 0.66
HADHAP40939 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HADHAP40939 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HADHAP40939 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HADHAP40939 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HADHAP40939 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.2■□□□□ 0.66
HADHAP40939 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HADHAP40939 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HADHAP40939 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HADHAP40939 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HADHAP40939 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.2■□□□□ 0.66
HADHAP40939 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.2■□□□□ 0.66
HADHAP40939 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
HADHAP40939 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HADHAP40939 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms