Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RPA3P35244 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPA3P35244 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.2■□□□□ 0.66
RPA3P35244 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPA3P35244 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPA3P35244 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.2■□□□□ 0.66
RPA3P35244 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPA3P35244 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPA3P35244 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RPA3P35244 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RPA3P35244 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RPA3P35244 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPA3P35244 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPA3P35244 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPA3P35244 ESRRAP1-201ENST00000400596 1257 ntBASIC19.2■□□□□ 0.66
RPA3P35244 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.2■□□□□ 0.66
RPA3P35244 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.2■□□□□ 0.66
RPA3P35244 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.2■□□□□ 0.66
RPA3P35244 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.2■□□□□ 0.66
RPA3P35244 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.2■□□□□ 0.66
RPA3P35244 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RPA3P35244 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPA3P35244 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.2■□□□□ 0.66
RPA3P35244 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.2■□□□□ 0.66
RPA3P35244 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPA3P35244 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.2■□□□□ 0.66
RPA3P35244 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPA3P35244 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RPA3P35244 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPA3P35244 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPA3P35244 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RPA3P35244 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
RPA3P35244 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RPA3P35244 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPA3P35244 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPA3P35244 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPA3P35244 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPA3P35244 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPA3P35244 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.19■□□□□ 0.66
RPA3P35244 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RPA3P35244 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPA3P35244 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPA3P35244 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPA3P35244 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.19■□□□□ 0.66
RPA3P35244 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.19■□□□□ 0.66
RPA3P35244 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RPA3P35244 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.19■□□□□ 0.66
RPA3P35244 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.19■□□□□ 0.66
RPA3P35244 MIR4651-201ENST00000582622 73 ntBASIC19.19■□□□□ 0.66
RPA3P35244 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.19■□□□□ 0.66
RPA3P35244 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPA3P35244 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.19■□□□□ 0.66
RPA3P35244 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RPA3P35244 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
RPA3P35244 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPA3P35244 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.19■□□□□ 0.66
RPA3P35244 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPA3P35244 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.19■□□□□ 0.66
RPA3P35244 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.19■□□□□ 0.66
RPA3P35244 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPA3P35244 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.19■□□□□ 0.66
RPA3P35244 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.18■□□□□ 0.66
RPA3P35244 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPA3P35244 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPA3P35244 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.18■□□□□ 0.66
RPA3P35244 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RPA3P35244 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPA3P35244 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.18■□□□□ 0.66
RPA3P35244 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.18■□□□□ 0.66
RPA3P35244 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.18■□□□□ 0.66
RPA3P35244 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPA3P35244 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPA3P35244 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.18■□□□□ 0.66
RPA3P35244 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPA3P35244 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPA3P35244 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RPA3P35244 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPA3P35244 AC008403.3-201ENST00000598924 454 ntBASIC19.18■□□□□ 0.66
RPA3P35244 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.18■□□□□ 0.66
RPA3P35244 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPA3P35244 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPA3P35244 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPA3P35244 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPA3P35244 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPA3P35244 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPA3P35244 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RPA3P35244 AC124283.5-201ENST00000624661 1809 ntBASIC19.18■□□□□ 0.66
RPA3P35244 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPA3P35244 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPA3P35244 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPA3P35244 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPA3P35244 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.18■□□□□ 0.66
RPA3P35244 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPA3P35244 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
RPA3P35244 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPA3P35244 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPA3P35244 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPA3P35244 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPA3P35244 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPA3P35244 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms