Protein–RNA interactions for Protein: P33991

MCM4, DNA replication licensing factor MCM4, humanhuman

Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4P33991 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
MCM4P33991 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
MCM4P33991 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC22.38■■□□□ 1.17
MCM4P33991 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
MCM4P33991 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
MCM4P33991 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
MCM4P33991 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
MCM4P33991 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
MCM4P33991 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC22.37■■□□□ 1.17
MCM4P33991 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC22.37■■□□□ 1.17
MCM4P33991 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
MCM4P33991 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
MCM4P33991 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
MCM4P33991 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
MCM4P33991 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC22.37■■□□□ 1.17
MCM4P33991 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC22.37■■□□□ 1.17
MCM4P33991 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
MCM4P33991 AC099398.1-201ENST00000567919 2776 ntBASIC22.37■■□□□ 1.17
MCM4P33991 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC22.37■■□□□ 1.17
MCM4P33991 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
MCM4P33991 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC22.37■■□□□ 1.17
MCM4P33991 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
MCM4P33991 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
MCM4P33991 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
MCM4P33991 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC22.37■■□□□ 1.17
MCM4P33991 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC22.37■■□□□ 1.17
MCM4P33991 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
MCM4P33991 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
MCM4P33991 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MCM4P33991 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
MCM4P33991 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
MCM4P33991 UBQLN4P1-201ENST00000461599 1801 ntBASIC22.36■■□□□ 1.17
MCM4P33991 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MCM4P33991 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
MCM4P33991 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
MCM4P33991 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC22.36■■□□□ 1.17
MCM4P33991 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
MCM4P33991 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MCM4P33991 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MCM4P33991 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
MCM4P33991 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
MCM4P33991 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
MCM4P33991 AL162412.1-201ENST00000567129 965 ntBASIC22.36■■□□□ 1.17
MCM4P33991 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC22.36■■□□□ 1.17
MCM4P33991 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC22.36■■□□□ 1.17
MCM4P33991 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC22.36■■□□□ 1.17
MCM4P33991 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC22.36■■□□□ 1.17
MCM4P33991 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
MCM4P33991 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MCM4P33991 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
MCM4P33991 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC22.36■■□□□ 1.17
MCM4P33991 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
MCM4P33991 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
MCM4P33991 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MCM4P33991 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MCM4P33991 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
MCM4P33991 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
MCM4P33991 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC22.35■■□□□ 1.17
MCM4P33991 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC22.35■■□□□ 1.17
MCM4P33991 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC22.35■■□□□ 1.17
MCM4P33991 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MCM4P33991 AC116351.2-201ENST00000606540 1585 ntBASIC22.35■■□□□ 1.17
MCM4P33991 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.35■■□□□ 1.17
MCM4P33991 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
MCM4P33991 PBX1-209ENST00000485769 834 ntTSL 2 BASIC22.35■■□□□ 1.17
MCM4P33991 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.35■■□□□ 1.17
MCM4P33991 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC22.35■■□□□ 1.17
MCM4P33991 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC22.35■■□□□ 1.17
MCM4P33991 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MCM4P33991 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MCM4P33991 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
MCM4P33991 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC22.35■■□□□ 1.17
MCM4P33991 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC22.35■■□□□ 1.17
MCM4P33991 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
MCM4P33991 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MCM4P33991 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC22.35■■□□□ 1.17
MCM4P33991 AC104417.2-201ENST00000562989 1793 ntBASIC22.35■■□□□ 1.17
MCM4P33991 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC22.35■■□□□ 1.17
MCM4P33991 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
MCM4P33991 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
MCM4P33991 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
MCM4P33991 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MCM4P33991 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
MCM4P33991 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC22.34■■□□□ 1.17
MCM4P33991 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
MCM4P33991 AC073592.3-201ENST00000625118 1834 ntBASIC22.34■■□□□ 1.17
MCM4P33991 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
MCM4P33991 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
MCM4P33991 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
MCM4P33991 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
MCM4P33991 AL512625.2-201ENST00000417533 625 ntBASIC22.34■■□□□ 1.17
MCM4P33991 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
MCM4P33991 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.34■■□□□ 1.17
MCM4P33991 AC105020.6-201ENST00000621523 1217 ntBASIC22.34■■□□□ 1.17
MCM4P33991 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
MCM4P33991 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
MCM4P33991 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
MCM4P33991 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
MCM4P33991 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
MCM4P33991 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms