Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.69■□□□□ 0.74
HOXC13P31276 FAM86EP-206ENST00000510506 987 ntBASIC19.69■□□□□ 0.74
HOXC13P31276 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC13P31276 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.69■□□□□ 0.74
HOXC13P31276 KRT126P-201ENST00000549467 1181 ntBASIC19.69■□□□□ 0.74
HOXC13P31276 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.69■□□□□ 0.74
HOXC13P31276 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.69■□□□□ 0.74
HOXC13P31276 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC13P31276 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC13P31276 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
HOXC13P31276 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.69■□□□□ 0.74
HOXC13P31276 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC13P31276 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC13P31276 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.68■□□□□ 0.74
HOXC13P31276 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.68■□□□□ 0.74
HOXC13P31276 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HOXC13P31276 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.68■□□□□ 0.74
HOXC13P31276 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC13P31276 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.68■□□□□ 0.74
HOXC13P31276 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC13P31276 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC13P31276 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC13P31276 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC13P31276 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC13P31276 IRX1P1-201ENST00000438849 1838 ntBASIC19.68■□□□□ 0.74
HOXC13P31276 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC13P31276 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC13P31276 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.68■□□□□ 0.74
HOXC13P31276 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HOXC13P31276 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.68■□□□□ 0.74
HOXC13P31276 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.68■□□□□ 0.74
HOXC13P31276 DUSP5P1-201ENST00000441325 1139 ntBASIC19.68■□□□□ 0.74
HOXC13P31276 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC13P31276 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC13P31276 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.68■□□□□ 0.74
HOXC13P31276 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.68■□□□□ 0.74
HOXC13P31276 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.68■□□□□ 0.74
HOXC13P31276 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
HOXC13P31276 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.68■□□□□ 0.74
HOXC13P31276 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC13P31276 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC13P31276 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.68■□□□□ 0.74
HOXC13P31276 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HOXC13P31276 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC13P31276 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.67■□□□□ 0.74
HOXC13P31276 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.67■□□□□ 0.74
HOXC13P31276 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC13P31276 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC13P31276 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC13P31276 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.67■□□□□ 0.74
HOXC13P31276 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.67■□□□□ 0.74
HOXC13P31276 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
HOXC13P31276 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC13P31276 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.67■□□□□ 0.74
HOXC13P31276 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.67■□□□□ 0.74
HOXC13P31276 AC009947.2-201ENST00000444014 672 ntBASIC19.67■□□□□ 0.74
HOXC13P31276 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.67■□□□□ 0.74
HOXC13P31276 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.67■□□□□ 0.74
HOXC13P31276 CKBP1-201ENST00000565489 1086 ntBASIC19.67■□□□□ 0.74
HOXC13P31276 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.67■□□□□ 0.74
HOXC13P31276 AC093458.2-201ENST00000623150 629 ntBASIC19.67■□□□□ 0.74
HOXC13P31276 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC13P31276 FEM1AP3-201ENST00000403722 1741 ntBASIC19.67■□□□□ 0.74
HOXC13P31276 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC13P31276 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HOXC13P31276 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.67■□□□□ 0.74
HOXC13P31276 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC13P31276 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HOXC13P31276 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXC13P31276 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC13P31276 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC13P31276 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
HOXC13P31276 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC13P31276 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC13P31276 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC13P31276 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC13P31276 PCED1CP-201ENST00000419887 785 ntBASIC19.66■□□□□ 0.74
HOXC13P31276 TPM4P1-201ENST00000436100 807 ntBASIC19.66■□□□□ 0.74
HOXC13P31276 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC13P31276 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC13P31276 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXC13P31276 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC13P31276 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC13P31276 AC141257.4-201ENST00000634557 245 ntBASIC19.66■□□□□ 0.74
HOXC13P31276 AC136944.6-201ENST00000634818 245 ntBASIC19.66■□□□□ 0.74
HOXC13P31276 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
HOXC13P31276 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.66■□□□□ 0.74
HOXC13P31276 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC13P31276 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC13P31276 FP475955.4-201ENST00000623131 1990 ntBASIC19.66■□□□□ 0.74
HOXC13P31276 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC13P31276 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC13P31276 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC13P31276 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC13P31276 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC13P31276 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC13P31276 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC13P31276 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC13P31276 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC13P31276 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms