Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AC009113.1-201ENST00000570267 2443 ntBASIC17.76■□□□□ 0.43
CHMP24386 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP24386 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP24386 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CHMP24386 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.76■□□□□ 0.43
CHMP24386 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP24386 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.76■□□□□ 0.43
CHMP24386 RPS2P55-201ENST00000397318 883 ntBASIC17.76■□□□□ 0.43
CHMP24386 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
CHMP24386 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.76■□□□□ 0.43
CHMP24386 AC107956.1-201ENST00000494359 873 ntBASIC17.76■□□□□ 0.43
CHMP24386 AC233702.5-201ENST00000584107 538 ntBASIC17.76■□□□□ 0.43
CHMP24386 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CHMP24386 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.76■□□□□ 0.43
CHMP24386 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.76■□□□□ 0.43
CHMP24386 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP24386 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.76■□□□□ 0.43
CHMP24386 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CHMP24386 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP24386 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP24386 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP24386 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP24386 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP24386 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CHMP24386 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.75■□□□□ 0.43
CHMP24386 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.75■□□□□ 0.43
CHMP24386 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.75■□□□□ 0.43
CHMP24386 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP24386 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.75■□□□□ 0.43
CHMP24386 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.75■□□□□ 0.43
CHMP24386 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP24386 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.75■□□□□ 0.43
CHMP24386 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.75■□□□□ 0.43
CHMP24386 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP24386 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP24386 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP24386 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP24386 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP24386 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP24386 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CHMP24386 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.75■□□□□ 0.43
CHMP24386 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP24386 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CHMP24386 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CHMP24386 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.75■□□□□ 0.43
CHMP24386 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP24386 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP24386 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.75■□□□□ 0.43
CHMP24386 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.75■□□□□ 0.43
CHMP24386 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP24386 Z99916.2-201ENST00000604037 246 ntBASIC17.75■□□□□ 0.43
CHMP24386 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.75■□□□□ 0.43
CHMP24386 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.75■□□□□ 0.43
CHMP24386 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CHMP24386 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.75■□□□□ 0.43
CHMP24386 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP24386 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
CHMP24386 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CHMP24386 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CHMP24386 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP24386 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.75■□□□□ 0.43
CHMP24386 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP24386 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.74■□□□□ 0.43
CHMP24386 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP24386 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.74■□□□□ 0.43
CHMP24386 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP24386 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP24386 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP24386 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP24386 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP24386 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP24386 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CHMP24386 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP24386 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.74■□□□□ 0.43
CHMP24386 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CHMP24386 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.74■□□□□ 0.43
CHMP24386 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CHMP24386 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP24386 AC079598.2-202ENST00000546624 1451 ntBASIC17.74■□□□□ 0.43
CHMP24386 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP24386 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CHMP24386 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.74■□□□□ 0.43
CHMP24386 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CHMP24386 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.74■□□□□ 0.43
CHMP24386 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP24386 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.73■□□□□ 0.43
CHMP24386 HTR7P1-201ENST00000538670 1336 ntBASIC17.73■□□□□ 0.43
CHMP24386 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CHMP24386 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.73■□□□□ 0.43
CHMP24386 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP24386 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP24386 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP24386 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP24386 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CHMP24386 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.73■□□□□ 0.43
CHMP24386 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP24386 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP24386 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.73■□□□□ 0.43
CHMP24386 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP24386 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms