Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB4AP20338 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB4AP20338 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB4AP20338 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB4AP20338 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB4AP20338 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB4AP20338 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.54□□□□□ -0.08
RAB4AP20338 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB4AP20338 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB4AP20338 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB4AP20338 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB4AP20338 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB4AP20338 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC14.54□□□□□ -0.08
RAB4AP20338 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC14.54□□□□□ -0.08
RAB4AP20338 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC14.54□□□□□ -0.08
RAB4AP20338 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC14.54□□□□□ -0.08
RAB4AP20338 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC14.54□□□□□ -0.08
RAB4AP20338 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB4AP20338 GRAMD4P7-201ENST00000578182 1232 ntBASIC14.54□□□□□ -0.08
RAB4AP20338 TRIR-202ENST00000588213 841 ntTSL 3 BASIC14.54□□□□□ -0.08
RAB4AP20338 AC233992.3-201ENST00000607491 485 ntBASIC14.54□□□□□ -0.08
RAB4AP20338 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB4AP20338 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB4AP20338 KRT8P36-201ENST00000489121 1440 ntBASIC14.54□□□□□ -0.08
RAB4AP20338 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RAB4AP20338 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB4AP20338 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
RAB4AP20338 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
RAB4AP20338 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB4AP20338 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC14.54□□□□□ -0.08
RAB4AP20338 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB4AP20338 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB4AP20338 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB4AP20338 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB4AP20338 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.54□□□□□ -0.08
RAB4AP20338 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB4AP20338 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB4AP20338 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB4AP20338 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB4AP20338 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB4AP20338 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB4AP20338 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB4AP20338 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB4AP20338 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB4AP20338 AC090164.3-201ENST00000610780 2143 ntBASIC14.53□□□□□ -0.08
RAB4AP20338 BICD1-207ENST00000551848 1962 ntBASIC14.53□□□□□ -0.08
RAB4AP20338 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RAB4AP20338 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB4AP20338 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB4AP20338 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB4AP20338 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB4AP20338 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
RAB4AP20338 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RAB4AP20338 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB4AP20338 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB4AP20338 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB4AP20338 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC14.53□□□□□ -0.08
RAB4AP20338 MFF-208ENST00000409616 1247 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB4AP20338 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB4AP20338 AICDA-202ENST00000537228 667 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB4AP20338 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB4AP20338 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB4AP20338 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB4AP20338 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
RAB4AP20338 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RAB4AP20338 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB4AP20338 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB4AP20338 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB4AP20338 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RAB4AP20338 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RAB4AP20338 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB4AP20338 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB4AP20338 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB4AP20338 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB4AP20338 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB4AP20338 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB4AP20338 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
RAB4AP20338 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC14.52□□□□□ -0.08
RAB4AP20338 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB4AP20338 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB4AP20338 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB4AP20338 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB4AP20338 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB4AP20338 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB4AP20338 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAB4AP20338 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAB4AP20338 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB4AP20338 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB4AP20338 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAB4AP20338 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
RAB4AP20338 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC14.52□□□□□ -0.09
RAB4AP20338 MIR4466-201ENST00000606121 54 ntBASIC14.52□□□□□ -0.09
RAB4AP20338 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAB4AP20338 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
RAB4AP20338 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB4AP20338 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
RAB4AP20338 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC14.52□□□□□ -0.09
RAB4AP20338 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAB4AP20338 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB4AP20338 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms