Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.1■□□□□ 0.65
VCLP18206 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VCLP18206 AC026471.5-201ENST00000615068 467 ntBASIC19.1■□□□□ 0.65
VCLP18206 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.1■□□□□ 0.65
VCLP18206 AL031985.4-201ENST00000642138 673 ntBASIC19.1■□□□□ 0.65
VCLP18206 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VCLP18206 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
VCLP18206 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.1■□□□□ 0.65
VCLP18206 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VCLP18206 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
VCLP18206 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VCLP18206 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.1■□□□□ 0.65
VCLP18206 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
VCLP18206 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.1■□□□□ 0.65
VCLP18206 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VCLP18206 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VCLP18206 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
VCLP18206 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VCLP18206 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VCLP18206 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VCLP18206 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
VCLP18206 AL049812.1-201ENST00000432563 2267 ntBASIC19.09■□□□□ 0.65
VCLP18206 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
VCLP18206 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VCLP18206 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VCLP18206 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VCLP18206 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VCLP18206 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VCLP18206 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VCLP18206 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VCLP18206 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
VCLP18206 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VCLP18206 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VCLP18206 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VCLP18206 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.09■□□□□ 0.65
VCLP18206 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VCLP18206 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.09■□□□□ 0.65
VCLP18206 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VCLP18206 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.09■□□□□ 0.65
VCLP18206 AC026271.3-201ENST00000571884 352 ntBASIC19.09■□□□□ 0.65
VCLP18206 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.09■□□□□ 0.65
VCLP18206 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.09■□□□□ 0.65
VCLP18206 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
VCLP18206 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VCLP18206 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
VCLP18206 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
VCLP18206 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.09■□□□□ 0.65
VCLP18206 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.09■□□□□ 0.65
VCLP18206 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VCLP18206 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
VCLP18206 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VCLP18206 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
VCLP18206 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.65
VCLP18206 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.08■□□□□ 0.65
VCLP18206 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.08■□□□□ 0.65
VCLP18206 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.08■□□□□ 0.65
VCLP18206 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.08■□□□□ 0.65
VCLP18206 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.08■□□□□ 0.65
VCLP18206 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.08■□□□□ 0.64
VCLP18206 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VCLP18206 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.08■□□□□ 0.64
VCLP18206 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.08■□□□□ 0.64
VCLP18206 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.08■□□□□ 0.64
VCLP18206 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VCLP18206 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
VCLP18206 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
VCLP18206 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.08■□□□□ 0.64
VCLP18206 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VCLP18206 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VCLP18206 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VCLP18206 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
VCLP18206 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VCLP18206 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
VCLP18206 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VCLP18206 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.08■□□□□ 0.64
VCLP18206 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
VCLP18206 Z82202.1-201ENST00000623446 1880 ntBASIC19.07■□□□□ 0.64
VCLP18206 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VCLP18206 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
VCLP18206 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VCLP18206 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.07■□□□□ 0.64
VCLP18206 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
VCLP18206 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
VCLP18206 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VCLP18206 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VCLP18206 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VCLP18206 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.07■□□□□ 0.64
VCLP18206 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.07■□□□□ 0.64
VCLP18206 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VCLP18206 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.07■□□□□ 0.64
VCLP18206 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
VCLP18206 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.07■□□□□ 0.64
VCLP18206 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.07■□□□□ 0.64
VCLP18206 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VCLP18206 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.07■□□□□ 0.64
VCLP18206 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VCLP18206 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
VCLP18206 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
VCLP18206 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VCLP18206 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms