Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.39■□□□□ 0.38
BMP4P12644 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.39■□□□□ 0.38
BMP4P12644 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
BMP4P12644 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
BMP4P12644 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BMP4P12644 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
BMP4P12644 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
BMP4P12644 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BMP4P12644 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BMP4P12644 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BMP4P12644 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
BMP4P12644 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.39■□□□□ 0.37
BMP4P12644 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
BMP4P12644 GCSHP5-201ENST00000443090 522 ntBASIC17.39■□□□□ 0.37
BMP4P12644 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BMP4P12644 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.39■□□□□ 0.37
BMP4P12644 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BMP4P12644 AC073648.6-201ENST00000641589 218 ntBASIC17.39■□□□□ 0.37
BMP4P12644 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
BMP4P12644 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
BMP4P12644 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BMP4P12644 AC009053.2-201ENST00000563701 2365 ntBASIC17.39■□□□□ 0.37
BMP4P12644 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BMP4P12644 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BMP4P12644 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
BMP4P12644 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.39■□□□□ 0.37
BMP4P12644 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.39■□□□□ 0.37
BMP4P12644 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
BMP4P12644 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
BMP4P12644 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
BMP4P12644 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BMP4P12644 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.38■□□□□ 0.37
BMP4P12644 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.38■□□□□ 0.37
BMP4P12644 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BMP4P12644 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
BMP4P12644 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
BMP4P12644 AL031598.1-201ENST00000561511 1773 ntBASIC17.38■□□□□ 0.37
BMP4P12644 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
BMP4P12644 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.38■□□□□ 0.37
BMP4P12644 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BMP4P12644 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.38■□□□□ 0.37
BMP4P12644 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BMP4P12644 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BMP4P12644 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BMP4P12644 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BMP4P12644 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BMP4P12644 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.38■□□□□ 0.37
BMP4P12644 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.38■□□□□ 0.37
BMP4P12644 UBE2SP1-201ENST00000450587 669 ntBASIC17.38■□□□□ 0.37
BMP4P12644 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
BMP4P12644 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.38■□□□□ 0.37
BMP4P12644 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.38■□□□□ 0.37
BMP4P12644 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BMP4P12644 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.38■□□□□ 0.37
BMP4P12644 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BMP4P12644 AL356652.1-201ENST00000615962 565 ntBASIC17.38■□□□□ 0.37
BMP4P12644 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BMP4P12644 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
BMP4P12644 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
BMP4P12644 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
BMP4P12644 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BMP4P12644 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.38■□□□□ 0.37
BMP4P12644 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BMP4P12644 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.38■□□□□ 0.37
BMP4P12644 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.38■□□□□ 0.37
BMP4P12644 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
BMP4P12644 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
BMP4P12644 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
BMP4P12644 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BMP4P12644 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.37■□□□□ 0.37
BMP4P12644 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BMP4P12644 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BMP4P12644 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
BMP4P12644 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BMP4P12644 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BMP4P12644 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
BMP4P12644 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BMP4P12644 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.37■□□□□ 0.37
BMP4P12644 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BMP4P12644 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BMP4P12644 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BMP4P12644 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.37■□□□□ 0.37
BMP4P12644 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
BMP4P12644 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BMP4P12644 SOX15-203ENST00000570788 1093 ntBASIC17.37■□□□□ 0.37
BMP4P12644 FAM197Y4-202ENST00000622692 608 ntBASIC17.37■□□□□ 0.37
BMP4P12644 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BMP4P12644 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
BMP4P12644 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
BMP4P12644 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BMP4P12644 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BMP4P12644 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BMP4P12644 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BMP4P12644 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.37■□□□□ 0.37
BMP4P12644 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
BMP4P12644 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
BMP4P12644 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
BMP4P12644 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
BMP4P12644 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
BMP4P12644 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms