Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.11■□□□□ 0.81
RB1P06400 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
RB1P06400 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.11■□□□□ 0.81
RB1P06400 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RB1P06400 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.11■□□□□ 0.81
RB1P06400 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.1■□□□□ 0.81
RB1P06400 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RB1P06400 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.1■□□□□ 0.81
RB1P06400 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RB1P06400 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RB1P06400 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RB1P06400 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RB1P06400 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RB1P06400 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RB1P06400 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.1■□□□□ 0.81
RB1P06400 KRT18P31-201ENST00000506277 1292 ntBASIC20.1■□□□□ 0.81
RB1P06400 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RB1P06400 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.1■□□□□ 0.81
RB1P06400 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.1■□□□□ 0.81
RB1P06400 AC023511.2-201ENST00000618803 211 ntBASIC20.1■□□□□ 0.81
RB1P06400 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.1■□□□□ 0.81
RB1P06400 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RB1P06400 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RB1P06400 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RB1P06400 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.1■□□□□ 0.81
RB1P06400 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RB1P06400 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RB1P06400 KRT8P7-201ENST00000533003 1432 ntBASIC20.1■□□□□ 0.81
RB1P06400 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RB1P06400 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.1■□□□□ 0.81
RB1P06400 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RB1P06400 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RB1P06400 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.09■□□□□ 0.81
RB1P06400 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RB1P06400 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.09■□□□□ 0.81
RB1P06400 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RB1P06400 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RB1P06400 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RB1P06400 AL022342.1-201ENST00000400363 863 ntBASIC20.09■□□□□ 0.81
RB1P06400 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RB1P06400 AC106795.1-205ENST00000512851 1056 ntBASIC20.09■□□□□ 0.81
RB1P06400 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
RB1P06400 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RB1P06400 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.09■□□□□ 0.81
RB1P06400 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RB1P06400 AC006538.3-201ENST00000612495 578 ntBASIC20.09■□□□□ 0.81
RB1P06400 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.09■□□□□ 0.81
RB1P06400 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RB1P06400 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
RB1P06400 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RB1P06400 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
RB1P06400 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RB1P06400 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.09■□□□□ 0.81
RB1P06400 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.08■□□□□ 0.81
RB1P06400 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RB1P06400 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
RB1P06400 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RB1P06400 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RB1P06400 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.08■□□□□ 0.81
RB1P06400 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
RB1P06400 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RB1P06400 TOB2P1-201ENST00000469761 992 ntBASIC20.08■□□□□ 0.81
RB1P06400 FOSL1P1-201ENST00000511041 816 ntBASIC20.08■□□□□ 0.81
RB1P06400 AL662844.1-201ENST00000546340 181 ntBASIC20.08■□□□□ 0.81
RB1P06400 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RB1P06400 RNF126P1-202ENST00000569893 925 ntBASIC20.08■□□□□ 0.81
RB1P06400 AC090616.6-201ENST00000582640 721 ntBASIC20.08■□□□□ 0.81
RB1P06400 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RB1P06400 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RB1P06400 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RB1P06400 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RB1P06400 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.08■□□□□ 0.8
RB1P06400 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RB1P06400 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
RB1P06400 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RB1P06400 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RB1P06400 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RB1P06400 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RB1P06400 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RB1P06400 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.07■□□□□ 0.8
RB1P06400 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.07■□□□□ 0.8
RB1P06400 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
RB1P06400 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RB1P06400 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.07■□□□□ 0.8
RB1P06400 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RB1P06400 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RB1P06400 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RB1P06400 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RB1P06400 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RB1P06400 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.07■□□□□ 0.8
RB1P06400 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.07■□□□□ 0.8
RB1P06400 AC079781.3-201ENST00000449110 356 ntBASIC20.07■□□□□ 0.8
RB1P06400 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RB1P06400 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RB1P06400 AC004263.2-201ENST00000617183 678 ntBASIC20.07■□□□□ 0.8
RB1P06400 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RB1P06400 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.07■□□□□ 0.8
RB1P06400 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RB1P06400 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RB1P06400 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms