Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.91■□□□□ 0.62
CAPNS1P04632 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPNS1P04632 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.9■□□□□ 0.62
CAPNS1P04632 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.9■□□□□ 0.62
CAPNS1P04632 FSCN1P1-201ENST00000568912 1481 ntBASIC18.9■□□□□ 0.62
CAPNS1P04632 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPNS1P04632 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CAPNS1P04632 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPNS1P04632 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CAPNS1P04632 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CAPNS1P04632 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPNS1P04632 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPNS1P04632 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPNS1P04632 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPNS1P04632 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CAPNS1P04632 AC128688.1-201ENST00000487626 519 ntBASIC18.9■□□□□ 0.62
CAPNS1P04632 YBX1P2-201ENST00000489612 999 ntBASIC18.9■□□□□ 0.62
CAPNS1P04632 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.9■□□□□ 0.62
CAPNS1P04632 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.9■□□□□ 0.62
CAPNS1P04632 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.9■□□□□ 0.62
CAPNS1P04632 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CAPNS1P04632 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
CAPNS1P04632 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.9■□□□□ 0.62
CAPNS1P04632 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CAPNS1P04632 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
CAPNS1P04632 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPNS1P04632 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPNS1P04632 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPNS1P04632 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPNS1P04632 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.9■□□□□ 0.62
CAPNS1P04632 AL049812.1-201ENST00000432563 2267 ntBASIC18.9■□□□□ 0.62
CAPNS1P04632 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CAPNS1P04632 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CAPNS1P04632 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPNS1P04632 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPNS1P04632 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPNS1P04632 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.9■□□□□ 0.62
CAPNS1P04632 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
CAPNS1P04632 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.89■□□□□ 0.62
CAPNS1P04632 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CAPNS1P04632 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CAPNS1P04632 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
CAPNS1P04632 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.89■□□□□ 0.61
CAPNS1P04632 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CAPNS1P04632 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.89■□□□□ 0.61
CAPNS1P04632 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CAPNS1P04632 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CAPNS1P04632 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CAPNS1P04632 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPNS1P04632 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPNS1P04632 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPNS1P04632 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CAPNS1P04632 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CAPNS1P04632 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.89■□□□□ 0.61
CAPNS1P04632 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.89■□□□□ 0.61
CAPNS1P04632 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.89■□□□□ 0.61
CAPNS1P04632 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPNS1P04632 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.89■□□□□ 0.61
CAPNS1P04632 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.89■□□□□ 0.61
CAPNS1P04632 AL031985.4-201ENST00000642138 673 ntBASIC18.89■□□□□ 0.61
CAPNS1P04632 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPNS1P04632 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CAPNS1P04632 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.89■□□□□ 0.61
CAPNS1P04632 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.89■□□□□ 0.61
CAPNS1P04632 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPNS1P04632 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.88■□□□□ 0.61
CAPNS1P04632 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPNS1P04632 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPNS1P04632 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPNS1P04632 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPNS1P04632 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPNS1P04632 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CAPNS1P04632 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CAPNS1P04632 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPNS1P04632 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPNS1P04632 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CAPNS1P04632 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CAPNS1P04632 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.88■□□□□ 0.61
CAPNS1P04632 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.88■□□□□ 0.61
CAPNS1P04632 DGCR10-201ENST00000609839 495 ntBASIC18.88■□□□□ 0.61
CAPNS1P04632 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.88■□□□□ 0.61
CAPNS1P04632 MIR2861-201ENST00000636310 90 ntBASIC18.88■□□□□ 0.61
CAPNS1P04632 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPNS1P04632 IER3-202ENST00000376377 1350 ntBASIC18.88■□□□□ 0.61
CAPNS1P04632 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.88■□□□□ 0.61
CAPNS1P04632 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.88■□□□□ 0.61
CAPNS1P04632 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.88■□□□□ 0.61
CAPNS1P04632 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.88■□□□□ 0.61
CAPNS1P04632 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPNS1P04632 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CAPNS1P04632 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CAPNS1P04632 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPNS1P04632 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CAPNS1P04632 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CAPNS1P04632 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPNS1P04632 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPNS1P04632 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
CAPNS1P04632 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.87■□□□□ 0.61
CAPNS1P04632 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
CAPNS1P04632 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms