Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DPB1P04440 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.09■□□□□ 0.33
HLA-DPB1P04440 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.09■□□□□ 0.33
HLA-DPB1P04440 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-DPB1P04440 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.09■□□□□ 0.33
HLA-DPB1P04440 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.09■□□□□ 0.33
HLA-DPB1P04440 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DPB1P04440 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
HLA-DPB1P04440 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HLA-DPB1P04440 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DPB1P04440 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DPB1P04440 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DPB1P04440 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DPB1P04440 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DPB1P04440 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DPB1P04440 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.09■□□□□ 0.33
HLA-DPB1P04440 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DPB1P04440 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-DPB1P04440 AL512353.2-201ENST00000448759 1962 ntBASIC17.09■□□□□ 0.33
HLA-DPB1P04440 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-DPB1P04440 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DPB1P04440 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HLA-DPB1P04440 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-DPB1P04440 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.08■□□□□ 0.33
HLA-DPB1P04440 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-DPB1P04440 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.08■□□□□ 0.33
HLA-DPB1P04440 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-DPB1P04440 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-DPB1P04440 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-DPB1P04440 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.08■□□□□ 0.33
HLA-DPB1P04440 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-DPB1P04440 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-DPB1P04440 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.08■□□□□ 0.33
HLA-DPB1P04440 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.08■□□□□ 0.33
HLA-DPB1P04440 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
HLA-DPB1P04440 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.08■□□□□ 0.33
HLA-DPB1P04440 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
HLA-DPB1P04440 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
HLA-DPB1P04440 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.08■□□□□ 0.32
HLA-DPB1P04440 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DPB1P04440 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.08■□□□□ 0.32
HLA-DPB1P04440 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DPB1P04440 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DPB1P04440 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
HLA-DPB1P04440 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DPB1P04440 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
HLA-DPB1P04440 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
HLA-DPB1P04440 OR6D1P-202ENST00000641007 5290 ntBASIC17.08■□□□□ 0.32
HLA-DPB1P04440 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.08■□□□□ 0.32
HLA-DPB1P04440 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
HLA-DPB1P04440 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
HLA-DPB1P04440 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DPB1P04440 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.08■□□□□ 0.32
HLA-DPB1P04440 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DPB1P04440 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DPB1P04440 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DPB1P04440 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DPB1P04440 ZNF815P-204ENST00000434898 1737 ntBASIC17.07■□□□□ 0.32
HLA-DPB1P04440 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DPB1P04440 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DPB1P04440 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.07■□□□□ 0.32
HLA-DPB1P04440 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DPB1P04440 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DPB1P04440 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DPB1P04440 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DPB1P04440 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DPB1P04440 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
HLA-DPB1P04440 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DPB1P04440 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HLA-DPB1P04440 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DPB1P04440 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DPB1P04440 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DPB1P04440 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DPB1P04440 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DPB1P04440 AC023632.3-201ENST00000521633 145 ntBASIC17.07■□□□□ 0.32
HLA-DPB1P04440 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.07■□□□□ 0.32
HLA-DPB1P04440 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
HLA-DPB1P04440 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DPB1P04440 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
HLA-DPB1P04440 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.07■□□□□ 0.32
HLA-DPB1P04440 IRX1P1-201ENST00000438849 1838 ntBASIC17.07■□□□□ 0.32
HLA-DPB1P04440 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
HLA-DPB1P04440 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DPB1P04440 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.06■□□□□ 0.32
HLA-DPB1P04440 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DPB1P04440 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DPB1P04440 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.06■□□□□ 0.32
HLA-DPB1P04440 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DPB1P04440 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DPB1P04440 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DPB1P04440 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DPB1P04440 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HLA-DPB1P04440 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.06■□□□□ 0.32
HLA-DPB1P04440 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DPB1P04440 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.06■□□□□ 0.32
HLA-DPB1P04440 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.06■□□□□ 0.32
HLA-DPB1P04440 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DPB1P04440 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.06■□□□□ 0.32
HLA-DPB1P04440 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DPB1P04440 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms