Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 CLN6-214ENST00000636314 442 ntTSL 3 BASIC22.92■■□□□ 1.26
COL1A1P02452 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
COL1A1P02452 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC22.91■■□□□ 1.26
COL1A1P02452 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
COL1A1P02452 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL1A1P02452 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
COL1A1P02452 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
COL1A1P02452 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC22.91■■□□□ 1.26
COL1A1P02452 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC22.91■■□□□ 1.26
COL1A1P02452 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL1A1P02452 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC22.91■■□□□ 1.26
COL1A1P02452 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC22.91■■□□□ 1.26
COL1A1P02452 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC22.91■■□□□ 1.26
COL1A1P02452 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC22.91■■□□□ 1.26
COL1A1P02452 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC22.91■■□□□ 1.26
COL1A1P02452 AL691432.3-201ENST00000621860 400 ntBASIC22.91■■□□□ 1.26
COL1A1P02452 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL1A1P02452 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL1A1P02452 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL1A1P02452 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL1A1P02452 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC22.91■■□□□ 1.26
COL1A1P02452 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL1A1P02452 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
COL1A1P02452 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL1A1P02452 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL1A1P02452 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL1A1P02452 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL1A1P02452 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
COL1A1P02452 ATP5G2P1-201ENST00000433580 426 ntBASIC22.9■■□□□ 1.26
COL1A1P02452 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC22.9■■□□□ 1.26
COL1A1P02452 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC22.9■■□□□ 1.26
COL1A1P02452 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
COL1A1P02452 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
COL1A1P02452 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL1A1P02452 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
COL1A1P02452 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC22.89■■□□□ 1.26
COL1A1P02452 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
COL1A1P02452 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC22.89■■□□□ 1.26
COL1A1P02452 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC22.89■■□□□ 1.26
COL1A1P02452 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
COL1A1P02452 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
COL1A1P02452 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
COL1A1P02452 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
COL1A1P02452 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.26
COL1A1P02452 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
COL1A1P02452 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
COL1A1P02452 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
COL1A1P02452 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
COL1A1P02452 AC026396.1-201ENST00000419388 421 ntBASIC22.89■■□□□ 1.25
COL1A1P02452 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC22.89■■□□□ 1.25
COL1A1P02452 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC22.89■■□□□ 1.25
COL1A1P02452 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC22.89■■□□□ 1.25
COL1A1P02452 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
COL1A1P02452 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC22.89■■□□□ 1.25
COL1A1P02452 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
COL1A1P02452 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
COL1A1P02452 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
COL1A1P02452 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
COL1A1P02452 IRX1P1-201ENST00000438849 1838 ntBASIC22.89■■□□□ 1.25
COL1A1P02452 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.89■■□□□ 1.25
COL1A1P02452 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL1A1P02452 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.88■■□□□ 1.25
COL1A1P02452 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COL1A1P02452 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COL1A1P02452 MCCD1P1-208ENST00000445732 328 ntBASIC22.88■■□□□ 1.25
COL1A1P02452 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC22.88■■□□□ 1.25
COL1A1P02452 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC22.88■■□□□ 1.25
COL1A1P02452 MIR3180-5-201ENST00000583743 153 ntBASIC22.88■■□□□ 1.25
COL1A1P02452 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL1A1P02452 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC22.88■■□□□ 1.25
COL1A1P02452 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COL1A1P02452 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COL1A1P02452 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL1A1P02452 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC22.88■■□□□ 1.25
COL1A1P02452 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL1A1P02452 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COL1A1P02452 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL1A1P02452 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
COL1A1P02452 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL1A1P02452 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL1A1P02452 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL1A1P02452 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC22.87■■□□□ 1.25
COL1A1P02452 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL1A1P02452 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL1A1P02452 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC22.87■■□□□ 1.25
COL1A1P02452 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL1A1P02452 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL1A1P02452 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
COL1A1P02452 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC22.87■■□□□ 1.25
COL1A1P02452 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
COL1A1P02452 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL1A1P02452 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC22.87■■□□□ 1.25
COL1A1P02452 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
COL1A1P02452 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC22.87■■□□□ 1.25
COL1A1P02452 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
COL1A1P02452 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC22.87■■□□□ 1.25
COL1A1P02452 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL1A1P02452 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL1A1P02452 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
COL1A1P02452 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms