Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA1P01909 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-DQA1P01909 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-DQA1P01909 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA1P01909 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
HLA-DQA1P01909 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
HLA-DQA1P01909 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-DQA1P01909 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA1P01909 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA1P01909 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
HLA-DQA1P01909 MIR572-201ENST00000384983 95 ntBASIC14.3□□□□□ -0.12
HLA-DQA1P01909 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA1P01909 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
HLA-DQA1P01909 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA1P01909 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC14.3□□□□□ -0.12
HLA-DQA1P01909 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA1P01909 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA1P01909 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA1P01909 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-DQA1P01909 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA1P01909 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA1P01909 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA1P01909 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-DQA1P01909 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA1P01909 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-DQA1P01909 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA1P01909 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQA1P01909 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQA1P01909 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQA1P01909 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
HLA-DQA1P01909 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
HLA-DQA1P01909 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQA1P01909 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQA1P01909 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQA1P01909 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQA1P01909 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQA1P01909 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQA1P01909 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQA1P01909 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
HLA-DQA1P01909 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQA1P01909 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQA1P01909 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQA1P01909 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-DQA1P01909 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-DQA1P01909 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-DQA1P01909 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQA1P01909 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQA1P01909 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-DQA1P01909 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQA1P01909 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HLA-DQA1P01909 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQA1P01909 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-DQA1P01909 AC012414.1-201ENST00000556676 535 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms