Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
IFNA1P01562 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
IFNA1P01562 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.05■□□□□ 0
IFNA1P01562 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
IFNA1P01562 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.05■□□□□ 0
IFNA1P01562 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.05■□□□□ 0
IFNA1P01562 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
IFNA1P01562 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
IFNA1P01562 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
IFNA1P01562 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC15.05■□□□□ -0
IFNA1P01562 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC15.05■□□□□ -0
IFNA1P01562 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC15.05■□□□□ -0
IFNA1P01562 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
IFNA1P01562 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC15.05■□□□□ -0
IFNA1P01562 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC15.05■□□□□ -0
IFNA1P01562 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
IFNA1P01562 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
IFNA1P01562 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
IFNA1P01562 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC15.05■□□□□ -0
IFNA1P01562 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
IFNA1P01562 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
IFNA1P01562 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
IFNA1P01562 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.05■□□□□ -0
IFNA1P01562 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
IFNA1P01562 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.05■□□□□ -0
IFNA1P01562 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.05■□□□□ -0
IFNA1P01562 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.05■□□□□ -0
IFNA1P01562 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
IFNA1P01562 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
IFNA1P01562 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
IFNA1P01562 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
IFNA1P01562 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IFNA1P01562 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.04■□□□□ -0
IFNA1P01562 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
IFNA1P01562 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IFNA1P01562 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.04■□□□□ -0
IFNA1P01562 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
IFNA1P01562 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.04■□□□□ -0
IFNA1P01562 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.04■□□□□ -0
IFNA1P01562 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.04■□□□□ -0
IFNA1P01562 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.04■□□□□ -0
IFNA1P01562 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
IFNA1P01562 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IFNA1P01562 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IFNA1P01562 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
IFNA1P01562 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.04■□□□□ -0
IFNA1P01562 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.04■□□□□ -0
IFNA1P01562 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IFNA1P01562 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
IFNA1P01562 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.04■□□□□ -0
IFNA1P01562 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
IFNA1P01562 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC15.04■□□□□ -0
IFNA1P01562 MPST-204ENST00000404393 1329 ntTSL 5 BASIC15.04■□□□□ -0
IFNA1P01562 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC15.04■□□□□ -0
IFNA1P01562 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC15.04■□□□□ -0
IFNA1P01562 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IFNA1P01562 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC15.04■□□□□ -0
IFNA1P01562 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC15.04■□□□□ -0
IFNA1P01562 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
IFNA1P01562 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC15.04■□□□□ -0
IFNA1P01562 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
IFNA1P01562 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IFNA1P01562 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IFNA1P01562 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IFNA1P01562 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
IFNA1P01562 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
IFNA1P01562 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.04■□□□□ -0
IFNA1P01562 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IFNA1P01562 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IFNA1P01562 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.04■□□□□ -0
IFNA1P01562 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
IFNA1P01562 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IFNA1P01562 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.03■□□□□ -0
IFNA1P01562 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
IFNA1P01562 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IFNA1P01562 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.03■□□□□ -0
IFNA1P01562 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
IFNA1P01562 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.03■□□□□ -0
IFNA1P01562 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC15.03■□□□□ -0
IFNA1P01562 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.03■□□□□ -0
IFNA1P01562 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IFNA1P01562 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC15.03■□□□□ -0
IFNA1P01562 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IFNA1P01562 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IFNA1P01562 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC15.03■□□□□ -0
IFNA1P01562 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC15.03■□□□□ -0
IFNA1P01562 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.03■□□□□ -0
IFNA1P01562 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC15.03■□□□□ -0
IFNA1P01562 AL355001.2-201ENST00000620617 1191 ntBASIC15.03■□□□□ -0
IFNA1P01562 ESPNP-201ENST00000270691 2015 ntBASIC15.03■□□□□ -0
IFNA1P01562 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.03■□□□□ -0
IFNA1P01562 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IFNA1P01562 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IFNA1P01562 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IFNA1P01562 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IFNA1P01562 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC15.03■□□□□ -0
IFNA1P01562 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.03■□□□□ -0
IFNA1P01562 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IFNA1P01562 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.02■□□□□ -0
IFNA1P01562 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms