Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CLPTM1O96005 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CLPTM1O96005 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.91■□□□□ 0.46
CLPTM1O96005 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.91■□□□□ 0.46
CLPTM1O96005 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLPTM1O96005 RAP2CP1-201ENST00000605103 478 ntBASIC17.91■□□□□ 0.46
CLPTM1O96005 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.91■□□□□ 0.46
CLPTM1O96005 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CLPTM1O96005 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLPTM1O96005 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.91■□□□□ 0.46
CLPTM1O96005 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CLPTM1O96005 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
CLPTM1O96005 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLPTM1O96005 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLPTM1O96005 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLPTM1O96005 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.91■□□□□ 0.46
CLPTM1O96005 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.91■□□□□ 0.46
CLPTM1O96005 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLPTM1O96005 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CLPTM1O96005 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CLPTM1O96005 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLPTM1O96005 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLPTM1O96005 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLPTM1O96005 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLPTM1O96005 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLPTM1O96005 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.9■□□□□ 0.46
CLPTM1O96005 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLPTM1O96005 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.9■□□□□ 0.46
CLPTM1O96005 AC026185.1-201ENST00000445748 174 ntBASIC17.9■□□□□ 0.46
CLPTM1O96005 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLPTM1O96005 TERF1P5-201ENST00000477545 1207 ntBASIC17.9■□□□□ 0.46
CLPTM1O96005 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.9■□□□□ 0.46
CLPTM1O96005 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.9■□□□□ 0.46
CLPTM1O96005 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.9■□□□□ 0.46
CLPTM1O96005 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.9■□□□□ 0.46
CLPTM1O96005 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLPTM1O96005 AC084018.2-201ENST00000613093 2607 ntBASIC17.9■□□□□ 0.46
CLPTM1O96005 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.9■□□□□ 0.46
CLPTM1O96005 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLPTM1O96005 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLPTM1O96005 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.9■□□□□ 0.46
CLPTM1O96005 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLPTM1O96005 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.9■□□□□ 0.46
CLPTM1O96005 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.9■□□□□ 0.46
CLPTM1O96005 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLPTM1O96005 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CLPTM1O96005 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.9■□□□□ 0.46
CLPTM1O96005 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CLPTM1O96005 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
CLPTM1O96005 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.89■□□□□ 0.45
CLPTM1O96005 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLPTM1O96005 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLPTM1O96005 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLPTM1O96005 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CLPTM1O96005 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.89■□□□□ 0.45
CLPTM1O96005 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLPTM1O96005 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLPTM1O96005 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLPTM1O96005 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.89■□□□□ 0.45
CLPTM1O96005 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.89■□□□□ 0.45
CLPTM1O96005 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLPTM1O96005 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
CLPTM1O96005 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.89■□□□□ 0.45
CLPTM1O96005 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.89■□□□□ 0.45
CLPTM1O96005 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLPTM1O96005 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.89■□□□□ 0.45
CLPTM1O96005 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.89■□□□□ 0.45
CLPTM1O96005 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.89■□□□□ 0.45
CLPTM1O96005 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CLPTM1O96005 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLPTM1O96005 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
CLPTM1O96005 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.89■□□□□ 0.45
CLPTM1O96005 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
CLPTM1O96005 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CLPTM1O96005 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.89■□□□□ 0.45
CLPTM1O96005 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
CLPTM1O96005 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLPTM1O96005 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLPTM1O96005 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CLPTM1O96005 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.89■□□□□ 0.45
CLPTM1O96005 LINC00896-202ENST00000609602 2128 ntBASIC17.89■□□□□ 0.45
CLPTM1O96005 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CLPTM1O96005 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLPTM1O96005 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLPTM1O96005 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.88■□□□□ 0.45
CLPTM1O96005 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLPTM1O96005 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLPTM1O96005 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLPTM1O96005 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLPTM1O96005 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.88■□□□□ 0.45
CLPTM1O96005 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLPTM1O96005 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.88■□□□□ 0.45
CLPTM1O96005 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLPTM1O96005 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLPTM1O96005 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLPTM1O96005 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLPTM1O96005 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLPTM1O96005 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.88■□□□□ 0.45
CLPTM1O96005 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CLPTM1O96005 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms