Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.96■□□□□ 0.63
NDUFS3O75489 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NDUFS3O75489 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
NDUFS3O75489 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.96■□□□□ 0.63
NDUFS3O75489 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.96■□□□□ 0.63
NDUFS3O75489 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.96■□□□□ 0.63
NDUFS3O75489 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NDUFS3O75489 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NDUFS3O75489 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
NDUFS3O75489 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NDUFS3O75489 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NDUFS3O75489 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
NDUFS3O75489 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
NDUFS3O75489 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NDUFS3O75489 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
NDUFS3O75489 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
NDUFS3O75489 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.96■□□□□ 0.63
NDUFS3O75489 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NDUFS3O75489 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NDUFS3O75489 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NDUFS3O75489 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
NDUFS3O75489 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NDUFS3O75489 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NDUFS3O75489 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NDUFS3O75489 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NDUFS3O75489 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.95■□□□□ 0.62
NDUFS3O75489 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NDUFS3O75489 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NDUFS3O75489 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NDUFS3O75489 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NDUFS3O75489 AL135905.2-201ENST00000584934 1404 ntBASIC18.95■□□□□ 0.62
NDUFS3O75489 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NDUFS3O75489 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
NDUFS3O75489 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
NDUFS3O75489 AC098590.1-201ENST00000468126 897 ntBASIC18.95■□□□□ 0.62
NDUFS3O75489 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NDUFS3O75489 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.95■□□□□ 0.62
NDUFS3O75489 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.95■□□□□ 0.62
NDUFS3O75489 AL031985.4-201ENST00000642138 673 ntBASIC18.95■□□□□ 0.62
NDUFS3O75489 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NDUFS3O75489 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.95■□□□□ 0.62
NDUFS3O75489 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NDUFS3O75489 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
NDUFS3O75489 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
NDUFS3O75489 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.95■□□□□ 0.62
NDUFS3O75489 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
NDUFS3O75489 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.95■□□□□ 0.62
NDUFS3O75489 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NDUFS3O75489 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NDUFS3O75489 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NDUFS3O75489 AC006333.2-201ENST00000607957 2099 ntBASIC18.94■□□□□ 0.62
NDUFS3O75489 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
NDUFS3O75489 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
NDUFS3O75489 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
NDUFS3O75489 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NDUFS3O75489 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.94■□□□□ 0.62
NDUFS3O75489 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NDUFS3O75489 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
NDUFS3O75489 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NDUFS3O75489 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NDUFS3O75489 ABHD17AP1-201ENST00000358206 933 ntBASIC18.94■□□□□ 0.62
NDUFS3O75489 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.94■□□□□ 0.62
NDUFS3O75489 GCSHP5-201ENST00000443090 522 ntBASIC18.94■□□□□ 0.62
NDUFS3O75489 UBE2SP1-201ENST00000450587 669 ntBASIC18.94■□□□□ 0.62
NDUFS3O75489 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NDUFS3O75489 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
NDUFS3O75489 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.94■□□□□ 0.62
NDUFS3O75489 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.94■□□□□ 0.62
NDUFS3O75489 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NDUFS3O75489 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NDUFS3O75489 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
NDUFS3O75489 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NDUFS3O75489 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
NDUFS3O75489 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
NDUFS3O75489 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NDUFS3O75489 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.94■□□□□ 0.62
NDUFS3O75489 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NDUFS3O75489 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NDUFS3O75489 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NDUFS3O75489 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
NDUFS3O75489 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NDUFS3O75489 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NDUFS3O75489 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NDUFS3O75489 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NDUFS3O75489 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
NDUFS3O75489 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.93■□□□□ 0.62
NDUFS3O75489 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NDUFS3O75489 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
NDUFS3O75489 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NDUFS3O75489 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.93■□□□□ 0.62
NDUFS3O75489 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.93■□□□□ 0.62
NDUFS3O75489 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.93■□□□□ 0.62
NDUFS3O75489 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.93■□□□□ 0.62
NDUFS3O75489 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NDUFS3O75489 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NDUFS3O75489 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NDUFS3O75489 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NDUFS3O75489 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NDUFS3O75489 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NDUFS3O75489 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms