Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDHGA12O60330 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDHGA12O60330 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGA12O60330 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGA12O60330 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGA12O60330 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
PCDHGA12O60330 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.83■□□□□ 0.61
PCDHGA12O60330 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
PCDHGA12O60330 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.83■□□□□ 0.61
PCDHGA12O60330 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PCDHGA12O60330 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHGA12O60330 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
PCDHGA12O60330 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHGA12O60330 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.83■□□□□ 0.6
PCDHGA12O60330 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.83■□□□□ 0.6
PCDHGA12O60330 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHGA12O60330 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.83■□□□□ 0.6
PCDHGA12O60330 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.83■□□□□ 0.6
PCDHGA12O60330 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PCDHGA12O60330 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA12O60330 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA12O60330 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PCDHGA12O60330 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA12O60330 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA12O60330 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHGA12O60330 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA12O60330 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PCDHGA12O60330 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PCDHGA12O60330 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA12O60330 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGA12O60330 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA12O60330 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGA12O60330 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA12O60330 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGA12O60330 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PCDHGA12O60330 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PCDHGA12O60330 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA12O60330 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHGA12O60330 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGA12O60330 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA12O60330 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA12O60330 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PCDHGA12O60330 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHGA12O60330 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHGA12O60330 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGA12O60330 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGA12O60330 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA12O60330 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDHGA12O60330 AL136038.3-201ENST00000561909 1096 ntBASIC18.82■□□□□ 0.6
PCDHGA12O60330 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGA12O60330 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA12O60330 KRT8P41-201ENST00000533985 1514 ntBASIC18.82■□□□□ 0.6
PCDHGA12O60330 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA12O60330 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA12O60330 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA12O60330 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA12O60330 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHGA12O60330 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHGA12O60330 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA12O60330 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHGA12O60330 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA12O60330 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHGA12O60330 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PCDHGA12O60330 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA12O60330 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA12O60330 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA12O60330 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PCDHGA12O60330 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA12O60330 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDHGA12O60330 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
PCDHGA12O60330 DUSP5P1-201ENST00000441325 1139 ntBASIC18.81■□□□□ 0.6
PCDHGA12O60330 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDHGA12O60330 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHGA12O60330 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDHGA12O60330 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDHGA12O60330 AL121894.2-201ENST00000602977 491 ntBASIC18.81■□□□□ 0.6
PCDHGA12O60330 AC093458.2-201ENST00000623150 629 ntBASIC18.81■□□□□ 0.6
PCDHGA12O60330 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHGA12O60330 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA12O60330 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHGA12O60330 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA12O60330 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHGA12O60330 AIRN-201ENST00000601203 4374 ntBASIC18.81■□□□□ 0.6
PCDHGA12O60330 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA12O60330 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PCDHGA12O60330 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHGA12O60330 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PCDHGA12O60330 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA12O60330 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PCDHGA12O60330 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PCDHGA12O60330 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA12O60330 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHGA12O60330 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA12O60330 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
PCDHGA12O60330 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA12O60330 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA12O60330 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PCDHGA12O60330 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA12O60330 TPM4P1-201ENST00000436100 807 ntBASIC18.8■□□□□ 0.6
PCDHGA12O60330 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms