Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC28A2O43868 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC28A2O43868 C2orf69P3-201ENST00000565542 1120 ntBASIC18.3■□□□□ 0.52
SLC28A2O43868 CR392000.1-201ENST00000624770 1228 ntBASIC18.3■□□□□ 0.52
SLC28A2O43868 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.3■□□□□ 0.52
SLC28A2O43868 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC28A2O43868 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SLC28A2O43868 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC28A2O43868 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC28A2O43868 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC28A2O43868 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC28A2O43868 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC28A2O43868 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC28A2O43868 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC28A2O43868 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
SLC28A2O43868 Z82202.1-201ENST00000623446 1880 ntBASIC18.29■□□□□ 0.52
SLC28A2O43868 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC28A2O43868 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC28A2O43868 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC28A2O43868 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC28A2O43868 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.29■□□□□ 0.52
SLC28A2O43868 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC28A2O43868 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
SLC28A2O43868 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC28A2O43868 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC28A2O43868 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC28A2O43868 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC28A2O43868 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.29■□□□□ 0.52
SLC28A2O43868 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC28A2O43868 AL691432.3-201ENST00000621860 400 ntBASIC18.29■□□□□ 0.52
SLC28A2O43868 AC093458.2-201ENST00000623150 629 ntBASIC18.29■□□□□ 0.52
SLC28A2O43868 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SLC28A2O43868 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC28A2O43868 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SLC28A2O43868 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC28A2O43868 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC28A2O43868 AC098818.2-201ENST00000564925 2320 ntBASIC18.29■□□□□ 0.52
SLC28A2O43868 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC28A2O43868 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC28A2O43868 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC28A2O43868 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC28A2O43868 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SLC28A2O43868 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC28A2O43868 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC28A2O43868 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC28A2O43868 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.28■□□□□ 0.52
SLC28A2O43868 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC28A2O43868 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC28A2O43868 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.28■□□□□ 0.52
SLC28A2O43868 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC28A2O43868 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC28A2O43868 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC28A2O43868 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC28A2O43868 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC28A2O43868 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC28A2O43868 AC116562.2-201ENST00000507042 360 ntBASIC18.28■□□□□ 0.52
SLC28A2O43868 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.28■□□□□ 0.52
SLC28A2O43868 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.28■□□□□ 0.52
SLC28A2O43868 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.28■□□□□ 0.52
SLC28A2O43868 AP000974.1-201ENST00000623909 2387 ntBASIC18.28■□□□□ 0.52
SLC28A2O43868 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC28A2O43868 AC116351.2-201ENST00000606540 1585 ntBASIC18.28■□□□□ 0.52
SLC28A2O43868 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC28A2O43868 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC28A2O43868 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC28A2O43868 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC28A2O43868 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC28A2O43868 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC28A2O43868 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC28A2O43868 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
SLC28A2O43868 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC28A2O43868 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC28A2O43868 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC28A2O43868 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC28A2O43868 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SLC28A2O43868 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.27■□□□□ 0.52
SLC28A2O43868 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
SLC28A2O43868 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC28A2O43868 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.27■□□□□ 0.52
SLC28A2O43868 AL032819.2-201ENST00000624543 2162 ntBASIC18.27■□□□□ 0.52
SLC28A2O43868 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.27■□□□□ 0.52
SLC28A2O43868 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC28A2O43868 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC28A2O43868 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SLC28A2O43868 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SLC28A2O43868 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC28A2O43868 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC28A2O43868 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC28A2O43868 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SLC28A2O43868 ECEL1P2-202ENST00000465689 757 ntBASIC18.27■□□□□ 0.52
SLC28A2O43868 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.27■□□□□ 0.52
SLC28A2O43868 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC28A2O43868 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SLC28A2O43868 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.51
SLC28A2O43868 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC28A2O43868 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC28A2O43868 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC28A2O43868 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC28A2O43868 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC28A2O43868 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms