Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC13.59□□□□□ -0.23
PAX4O43316 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
PAX4O43316 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PAX4O43316 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
PAX4O43316 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PAX4O43316 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PAX4O43316 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
PAX4O43316 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
PAX4O43316 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PAX4O43316 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.58□□□□□ -0.23
PAX4O43316 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
PAX4O43316 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC13.58□□□□□ -0.23
PAX4O43316 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC13.58□□□□□ -0.23
PAX4O43316 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
PAX4O43316 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
PAX4O43316 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC13.58□□□□□ -0.24
PAX4O43316 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC13.58□□□□□ -0.24
PAX4O43316 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PAX4O43316 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
PAX4O43316 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
PAX4O43316 AC093484.2-201ENST00000580996 2166 ntBASIC13.58□□□□□ -0.24
PAX4O43316 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC13.58□□□□□ -0.24
PAX4O43316 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
PAX4O43316 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PAX4O43316 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PAX4O43316 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PAX4O43316 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PAX4O43316 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC13.58□□□□□ -0.24
PAX4O43316 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PAX4O43316 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC13.58□□□□□ -0.24
PAX4O43316 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC13.58□□□□□ -0.24
PAX4O43316 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC13.58□□□□□ -0.24
PAX4O43316 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC13.58□□□□□ -0.24
PAX4O43316 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC13.58□□□□□ -0.24
PAX4O43316 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PAX4O43316 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC13.58□□□□□ -0.24
PAX4O43316 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC13.58□□□□□ -0.24
PAX4O43316 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
PAX4O43316 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
PAX4O43316 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PAX4O43316 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC13.58□□□□□ -0.24
PAX4O43316 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PAX4O43316 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PAX4O43316 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PAX4O43316 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PAX4O43316 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC13.58□□□□□ -0.24
PAX4O43316 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PAX4O43316 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.24
PAX4O43316 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PAX4O43316 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC13.58□□□□□ -0.24
PAX4O43316 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX4O43316 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PAX4O43316 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX4O43316 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX4O43316 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX4O43316 AC116562.4-201ENST00000641316 2276 ntBASIC13.57□□□□□ -0.24
PAX4O43316 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC13.57□□□□□ -0.24
PAX4O43316 AL135905.2-201ENST00000584934 1404 ntBASIC13.57□□□□□ -0.24
PAX4O43316 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX4O43316 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX4O43316 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PAX4O43316 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
PAX4O43316 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX4O43316 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX4O43316 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX4O43316 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PAX4O43316 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PAX4O43316 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX4O43316 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PAX4O43316 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX4O43316 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX4O43316 GCSHP5-201ENST00000443090 522 ntBASIC13.57□□□□□ -0.24
PAX4O43316 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC13.57□□□□□ -0.24
PAX4O43316 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC13.57□□□□□ -0.24
PAX4O43316 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC13.57□□□□□ -0.24
PAX4O43316 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
PAX4O43316 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.57□□□□□ -0.24
PAX4O43316 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
PAX4O43316 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
PAX4O43316 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX4O43316 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
PAX4O43316 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC13.57□□□□□ -0.24
PAX4O43316 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX4O43316 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
PAX4O43316 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC13.57□□□□□ -0.24
PAX4O43316 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
PAX4O43316 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX4O43316 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC13.57□□□□□ -0.24
PAX4O43316 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
PAX4O43316 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PAX4O43316 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC13.56□□□□□ -0.24
PAX4O43316 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
PAX4O43316 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PAX4O43316 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
PAX4O43316 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
PAX4O43316 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
PAX4O43316 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
PAX4O43316 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
PAX4O43316 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
PAX4O43316 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms