Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
NDUFA4O00483 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.6□□□□□ -0.07
NDUFA4O00483 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFA4O00483 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.6□□□□□ -0.07
NDUFA4O00483 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.6□□□□□ -0.07
NDUFA4O00483 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
NDUFA4O00483 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFA4O00483 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFA4O00483 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC14.6□□□□□ -0.07
NDUFA4O00483 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFA4O00483 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFA4O00483 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
NDUFA4O00483 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFA4O00483 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFA4O00483 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFA4O00483 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFA4O00483 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC14.6□□□□□ -0.07
NDUFA4O00483 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFA4O00483 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFA4O00483 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFA4O00483 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.59□□□□□ -0.07
NDUFA4O00483 AC087289.5-201ENST00000586076 3175 ntBASIC14.59□□□□□ -0.07
NDUFA4O00483 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFA4O00483 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFA4O00483 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFA4O00483 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
NDUFA4O00483 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC14.59□□□□□ -0.07
NDUFA4O00483 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
NDUFA4O00483 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFA4O00483 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFA4O00483 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NDUFA4O00483 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
NDUFA4O00483 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC14.59□□□□□ -0.07
NDUFA4O00483 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.59□□□□□ -0.07
NDUFA4O00483 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFA4O00483 NUDT16P1-203ENST00000513809 620 ntBASIC14.59□□□□□ -0.07
NDUFA4O00483 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.59□□□□□ -0.07
NDUFA4O00483 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.59□□□□□ -0.07
NDUFA4O00483 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
NDUFA4O00483 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC14.59□□□□□ -0.07
NDUFA4O00483 DGCR10-201ENST00000609839 495 ntBASIC14.59□□□□□ -0.07
NDUFA4O00483 AC113410.3-201ENST00000623366 203 ntBASIC14.59□□□□□ -0.07
NDUFA4O00483 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFA4O00483 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFA4O00483 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFA4O00483 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFA4O00483 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFA4O00483 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC14.59□□□□□ -0.07
NDUFA4O00483 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFA4O00483 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFA4O00483 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFA4O00483 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.59□□□□□ -0.07
NDUFA4O00483 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFA4O00483 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC14.58□□□□□ -0.07
NDUFA4O00483 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
NDUFA4O00483 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
NDUFA4O00483 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC14.58□□□□□ -0.07
NDUFA4O00483 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
NDUFA4O00483 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
NDUFA4O00483 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
NDUFA4O00483 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
NDUFA4O00483 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC14.58□□□□□ -0.07
NDUFA4O00483 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NDUFA4O00483 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NDUFA4O00483 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFA4O00483 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFA4O00483 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFA4O00483 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFA4O00483 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFA4O00483 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.58□□□□□ -0.08
NDUFA4O00483 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFA4O00483 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
NDUFA4O00483 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFA4O00483 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
NDUFA4O00483 AL355355.2-201ENST00000442321 338 ntBASIC14.58□□□□□ -0.08
NDUFA4O00483 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC14.58□□□□□ -0.08
NDUFA4O00483 AC011506.1-201ENST00000474329 610 ntBASIC14.58□□□□□ -0.08
NDUFA4O00483 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFA4O00483 AC116562.2-201ENST00000507042 360 ntBASIC14.58□□□□□ -0.08
NDUFA4O00483 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.58□□□□□ -0.08
NDUFA4O00483 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.58□□□□□ -0.08
NDUFA4O00483 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC14.58□□□□□ -0.08
NDUFA4O00483 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.58□□□□□ -0.08
NDUFA4O00483 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC14.58□□□□□ -0.08
NDUFA4O00483 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC14.58□□□□□ -0.08
NDUFA4O00483 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC14.58□□□□□ -0.08
NDUFA4O00483 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.58□□□□□ -0.08
NDUFA4O00483 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFA4O00483 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFA4O00483 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFA4O00483 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFA4O00483 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC14.58□□□□□ -0.08
NDUFA4O00483 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC14.58□□□□□ -0.08
NDUFA4O00483 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFA4O00483 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC14.58□□□□□ -0.08
NDUFA4O00483 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
NDUFA4O00483 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFA4O00483 AC006333.2-201ENST00000607957 2099 ntBASIC14.57□□□□□ -0.08
NDUFA4O00483 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NDUFA4O00483 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms