Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
EIF3FO00303 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EIF3FO00303 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
EIF3FO00303 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EIF3FO00303 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
EIF3FO00303 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.61■□□□□ 0.57
EIF3FO00303 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
EIF3FO00303 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EIF3FO00303 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EIF3FO00303 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
EIF3FO00303 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EIF3FO00303 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EIF3FO00303 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EIF3FO00303 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.6■□□□□ 0.57
EIF3FO00303 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.6■□□□□ 0.57
EIF3FO00303 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.6■□□□□ 0.57
EIF3FO00303 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EIF3FO00303 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.6■□□□□ 0.57
EIF3FO00303 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EIF3FO00303 MIR718-201ENST00000390190 70 ntBASIC18.6■□□□□ 0.57
EIF3FO00303 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.6■□□□□ 0.57
EIF3FO00303 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EIF3FO00303 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.6■□□□□ 0.57
EIF3FO00303 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.6■□□□□ 0.57
EIF3FO00303 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.6■□□□□ 0.57
EIF3FO00303 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EIF3FO00303 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EIF3FO00303 AC113410.3-201ENST00000623366 203 ntBASIC18.6■□□□□ 0.57
EIF3FO00303 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EIF3FO00303 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
EIF3FO00303 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
EIF3FO00303 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
EIF3FO00303 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EIF3FO00303 CROCCP3-202ENST00000420820 1947 ntBASIC18.6■□□□□ 0.57
EIF3FO00303 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
EIF3FO00303 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EIF3FO00303 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
EIF3FO00303 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EIF3FO00303 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
EIF3FO00303 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
EIF3FO00303 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
EIF3FO00303 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.59■□□□□ 0.57
EIF3FO00303 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.59■□□□□ 0.57
EIF3FO00303 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
EIF3FO00303 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
EIF3FO00303 AC096733.2-201ENST00000609937 1394 ntBASIC18.59■□□□□ 0.57
EIF3FO00303 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EIF3FO00303 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EIF3FO00303 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.59■□□□□ 0.57
EIF3FO00303 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EIF3FO00303 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EIF3FO00303 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.59■□□□□ 0.57
EIF3FO00303 AC008040.2-201ENST00000461049 708 ntBASIC18.59■□□□□ 0.57
EIF3FO00303 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.59■□□□□ 0.57
EIF3FO00303 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.59■□□□□ 0.57
EIF3FO00303 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.59■□□□□ 0.57
EIF3FO00303 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.59■□□□□ 0.57
EIF3FO00303 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.59■□□□□ 0.57
EIF3FO00303 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EIF3FO00303 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EIF3FO00303 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.59■□□□□ 0.57
EIF3FO00303 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
EIF3FO00303 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.59■□□□□ 0.57
EIF3FO00303 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
EIF3FO00303 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.58■□□□□ 0.57
EIF3FO00303 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.58■□□□□ 0.57
EIF3FO00303 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
EIF3FO00303 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
EIF3FO00303 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
EIF3FO00303 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
EIF3FO00303 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
EIF3FO00303 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
EIF3FO00303 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
EIF3FO00303 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
EIF3FO00303 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
EIF3FO00303 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.58■□□□□ 0.56
EIF3FO00303 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
EIF3FO00303 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.58■□□□□ 0.56
EIF3FO00303 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.58■□□□□ 0.56
EIF3FO00303 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
EIF3FO00303 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
EIF3FO00303 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
EIF3FO00303 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
EIF3FO00303 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
EIF3FO00303 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
EIF3FO00303 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
EIF3FO00303 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.58■□□□□ 0.56
EIF3FO00303 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
EIF3FO00303 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
EIF3FO00303 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EIF3FO00303 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EIF3FO00303 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
EIF3FO00303 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EIF3FO00303 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EIF3FO00303 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EIF3FO00303 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
EIF3FO00303 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EIF3FO00303 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
EIF3FO00303 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.57■□□□□ 0.56
EIF3FO00303 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms