Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX39AO00148 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX39AO00148 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.37■■□□□ 1.01
DDX39AO00148 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.37■■□□□ 1.01
DDX39AO00148 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.37■■□□□ 1.01
DDX39AO00148 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
DDX39AO00148 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
DDX39AO00148 AC104076.2-201ENST00000448912 469 ntBASIC21.37■■□□□ 1.01
DDX39AO00148 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX39AO00148 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.37■■□□□ 1.01
DDX39AO00148 AC008622.2-201ENST00000617006 1229 ntBASIC21.37■■□□□ 1.01
DDX39AO00148 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.37■■□□□ 1.01
DDX39AO00148 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX39AO00148 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX39AO00148 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX39AO00148 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX39AO00148 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.37■■□□□ 1.01
DDX39AO00148 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
DDX39AO00148 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX39AO00148 KRT8P45-201ENST00000414328 1447 ntBASIC21.37■■□□□ 1.01
DDX39AO00148 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.37■■□□□ 1.01
DDX39AO00148 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.37■■□□□ 1.01
DDX39AO00148 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
DDX39AO00148 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX39AO00148 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX39AO00148 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.37■■□□□ 1.01
DDX39AO00148 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.37■■□□□ 1.01
DDX39AO00148 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX39AO00148 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DDX39AO00148 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DDX39AO00148 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
DDX39AO00148 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.36■■□□□ 1.01
DDX39AO00148 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX39AO00148 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX39AO00148 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DDX39AO00148 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
DDX39AO00148 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.36■■□□□ 1.01
DDX39AO00148 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
DDX39AO00148 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
DDX39AO00148 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX39AO00148 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DDX39AO00148 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.36■■□□□ 1.01
DDX39AO00148 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.36■■□□□ 1.01
DDX39AO00148 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.36■■□□□ 1.01
DDX39AO00148 AL049597.2-201ENST00000565575 961 ntBASIC21.36■■□□□ 1.01
DDX39AO00148 MIR4674-201ENST00000582457 87 ntBASIC21.36■■□□□ 1.01
DDX39AO00148 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.36■■□□□ 1.01
DDX39AO00148 AC006011.2-201ENST00000621313 1158 ntBASIC21.36■■□□□ 1.01
DDX39AO00148 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX39AO00148 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX39AO00148 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.36■■□□□ 1.01
DDX39AO00148 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX39AO00148 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
DDX39AO00148 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX39AO00148 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.36■■□□□ 1.01
DDX39AO00148 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
DDX39AO00148 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
DDX39AO00148 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.35■■□□□ 1.01
DDX39AO00148 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX39AO00148 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX39AO00148 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.35■■□□□ 1.01
DDX39AO00148 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
DDX39AO00148 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
DDX39AO00148 SLC25A24-204ENST00000569674 2357 ntBASIC21.35■■□□□ 1.01
DDX39AO00148 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX39AO00148 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
DDX39AO00148 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
DDX39AO00148 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.35■■□□□ 1.01
DDX39AO00148 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
DDX39AO00148 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX39AO00148 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
DDX39AO00148 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
DDX39AO00148 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.35■■□□□ 1.01
DDX39AO00148 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.35■■□□□ 1.01
DDX39AO00148 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
DDX39AO00148 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX39AO00148 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
DDX39AO00148 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX39AO00148 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX39AO00148 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.34■■□□□ 1.01
DDX39AO00148 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.34■■□□□ 1.01
DDX39AO00148 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX39AO00148 AC116562.4-201ENST00000641316 2276 ntBASIC21.34■■□□□ 1.01
DDX39AO00148 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX39AO00148 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX39AO00148 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.34■■□□□ 1.01
DDX39AO00148 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DDX39AO00148 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.34■■□□□ 1.01
DDX39AO00148 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX39AO00148 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DDX39AO00148 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX39AO00148 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.34■■□□□ 1.01
DDX39AO00148 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.34■■□□□ 1.01
DDX39AO00148 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.34■■□□□ 1.01
DDX39AO00148 IRX1P1-201ENST00000438849 1838 ntBASIC21.34■■□□□ 1.01
DDX39AO00148 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX39AO00148 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX39AO00148 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX39AO00148 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX39AO00148 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms