Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.84■□□□□ 0.29
NPIPB4C9JG80 CD177P1-201ENST00000606252 935 ntBASIC16.84■□□□□ 0.29
NPIPB4C9JG80 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPB4C9JG80 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPB4C9JG80 AC096733.2-201ENST00000609937 1394 ntBASIC16.84■□□□□ 0.29
NPIPB4C9JG80 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.84■□□□□ 0.29
NPIPB4C9JG80 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.84■□□□□ 0.29
NPIPB4C9JG80 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.84■□□□□ 0.29
NPIPB4C9JG80 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPB4C9JG80 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPB4C9JG80 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.84■□□□□ 0.29
NPIPB4C9JG80 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPB4C9JG80 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPB4C9JG80 ANO7L1-203ENST00000602586 1720 ntBASIC16.84■□□□□ 0.29
NPIPB4C9JG80 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPB4C9JG80 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPB4C9JG80 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.84■□□□□ 0.29
NPIPB4C9JG80 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
NPIPB4C9JG80 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
NPIPB4C9JG80 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPIPB4C9JG80 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPIPB4C9JG80 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPIPB4C9JG80 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
NPIPB4C9JG80 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPIPB4C9JG80 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
NPIPB4C9JG80 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.83■□□□□ 0.28
NPIPB4C9JG80 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
NPIPB4C9JG80 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPIPB4C9JG80 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NPIPB4C9JG80 RPS2P55-201ENST00000397318 883 ntBASIC16.83■□□□□ 0.28
NPIPB4C9JG80 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPIPB4C9JG80 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.83■□□□□ 0.28
NPIPB4C9JG80 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.83■□□□□ 0.28
NPIPB4C9JG80 AC008040.2-201ENST00000461049 708 ntBASIC16.83■□□□□ 0.28
NPIPB4C9JG80 AC107956.1-201ENST00000494359 873 ntBASIC16.83■□□□□ 0.28
NPIPB4C9JG80 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPIPB4C9JG80 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.83■□□□□ 0.28
NPIPB4C9JG80 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.83■□□□□ 0.28
NPIPB4C9JG80 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.83■□□□□ 0.28
NPIPB4C9JG80 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.83■□□□□ 0.28
NPIPB4C9JG80 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPIPB4C9JG80 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
NPIPB4C9JG80 AC233702.5-201ENST00000584107 538 ntBASIC16.83■□□□□ 0.28
NPIPB4C9JG80 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.83■□□□□ 0.28
NPIPB4C9JG80 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.83■□□□□ 0.28
NPIPB4C9JG80 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
NPIPB4C9JG80 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NPIPB4C9JG80 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPIPB4C9JG80 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPIPB4C9JG80 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
NPIPB4C9JG80 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPB4C9JG80 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPB4C9JG80 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.82■□□□□ 0.28
NPIPB4C9JG80 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPB4C9JG80 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPB4C9JG80 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
NPIPB4C9JG80 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPB4C9JG80 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPB4C9JG80 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPB4C9JG80 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPB4C9JG80 NUDT16P1-203ENST00000513809 620 ntBASIC16.82■□□□□ 0.28
NPIPB4C9JG80 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.82■□□□□ 0.28
NPIPB4C9JG80 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.82■□□□□ 0.28
NPIPB4C9JG80 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
NPIPB4C9JG80 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPB4C9JG80 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPB4C9JG80 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPB4C9JG80 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPB4C9JG80 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPB4C9JG80 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.82■□□□□ 0.28
NPIPB4C9JG80 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.82■□□□□ 0.28
NPIPB4C9JG80 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.82■□□□□ 0.28
NPIPB4C9JG80 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPB4C9JG80 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.82■□□□□ 0.28
NPIPB4C9JG80 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NPIPB4C9JG80 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPB4C9JG80 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.81■□□□□ 0.28
NPIPB4C9JG80 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPB4C9JG80 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.81■□□□□ 0.28
NPIPB4C9JG80 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NPIPB4C9JG80 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPB4C9JG80 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.81■□□□□ 0.28
NPIPB4C9JG80 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPB4C9JG80 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPB4C9JG80 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPB4C9JG80 FAM197Y1-201ENST00000421178 764 ntBASIC16.81■□□□□ 0.28
NPIPB4C9JG80 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.81■□□□□ 0.28
NPIPB4C9JG80 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
NPIPB4C9JG80 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPB4C9JG80 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.81■□□□□ 0.28
NPIPB4C9JG80 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPB4C9JG80 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPB4C9JG80 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPB4C9JG80 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPB4C9JG80 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
NPIPB4C9JG80 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.81■□□□□ 0.28
NPIPB4C9JG80 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPB4C9JG80 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPB4C9JG80 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPB4C9JG80 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms