Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.06■□□□□ 0.64
TRIM49D1C9J1S8 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.06■□□□□ 0.64
TRIM49D1C9J1S8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.06■□□□□ 0.64
TRIM49D1C9J1S8 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.06■□□□□ 0.64
TRIM49D1C9J1S8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM49D1C9J1S8 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM49D1C9J1S8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM49D1C9J1S8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TRIM49D1C9J1S8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM49D1C9J1S8 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM49D1C9J1S8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM49D1C9J1S8 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM49D1C9J1S8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM49D1C9J1S8 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM49D1C9J1S8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM49D1C9J1S8 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM49D1C9J1S8 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
TRIM49D1C9J1S8 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM49D1C9J1S8 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM49D1C9J1S8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM49D1C9J1S8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM49D1C9J1S8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM49D1C9J1S8 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM49D1C9J1S8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM49D1C9J1S8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM49D1C9J1S8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM49D1C9J1S8 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM49D1C9J1S8 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM49D1C9J1S8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM49D1C9J1S8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM49D1C9J1S8 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.05■□□□□ 0.64
TRIM49D1C9J1S8 PNMA6B-201ENST00000538162 1200 ntBASIC19.05■□□□□ 0.64
TRIM49D1C9J1S8 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM49D1C9J1S8 AC120498.8-201ENST00000614275 531 ntBASIC19.05■□□□□ 0.64
TRIM49D1C9J1S8 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
TRIM49D1C9J1S8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM49D1C9J1S8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
TRIM49D1C9J1S8 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM49D1C9J1S8 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TRIM49D1C9J1S8 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM49D1C9J1S8 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM49D1C9J1S8 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM49D1C9J1S8 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM49D1C9J1S8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
TRIM49D1C9J1S8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM49D1C9J1S8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM49D1C9J1S8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.04■□□□□ 0.64
TRIM49D1C9J1S8 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM49D1C9J1S8 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM49D1C9J1S8 NOC2LP1-202ENST00000452600 2235 ntBASIC19.04■□□□□ 0.64
TRIM49D1C9J1S8 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM49D1C9J1S8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM49D1C9J1S8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM49D1C9J1S8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM49D1C9J1S8 HCG11-201ENST00000411553 5696 ntBASIC19.04■□□□□ 0.64
TRIM49D1C9J1S8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM49D1C9J1S8 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM49D1C9J1S8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TRIM49D1C9J1S8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM49D1C9J1S8 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM49D1C9J1S8 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.04■□□□□ 0.64
TRIM49D1C9J1S8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.04■□□□□ 0.64
TRIM49D1C9J1S8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM49D1C9J1S8 AL121829.2-201ENST00000620908 328 ntBASIC19.04■□□□□ 0.64
TRIM49D1C9J1S8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM49D1C9J1S8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.04■□□□□ 0.64
TRIM49D1C9J1S8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM49D1C9J1S8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 SLC29A4P1-201ENST00000398760 971 ntBASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 GUSBP6-202ENST00000438529 1198 ntBASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 AC006970.2-201ENST00000450065 779 ntBASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 AC097658.1-201ENST00000475555 843 ntBASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 AL137784.2-201ENST00000607332 1000 ntBASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 MYC-209ENST00000641252 345 ntBASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms