Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01549A6NIU2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC01549A6NIU2 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
LINC01549A6NIU2 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01549A6NIU2 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01549A6NIU2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01549A6NIU2 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
LINC01549A6NIU2 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01549A6NIU2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01549A6NIU2 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
LINC01549A6NIU2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01549A6NIU2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC13.52□□□□□ -0.25
LINC01549A6NIU2 GNAS-203ENST00000306120 1878 ntBASIC13.52□□□□□ -0.25
LINC01549A6NIU2 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01549A6NIU2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
LINC01549A6NIU2 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01549A6NIU2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC13.52□□□□□ -0.25
LINC01549A6NIU2 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC01549A6NIU2 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01549A6NIU2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01549A6NIU2 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 FEM1AP3-201ENST00000403722 1741 ntBASIC13.51□□□□□ -0.25
LINC01549A6NIU2 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 AC116351.2-201ENST00000606540 1585 ntBASIC13.51□□□□□ -0.25
LINC01549A6NIU2 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 AL356441.2-201ENST00000443009 864 ntBASIC13.51□□□□□ -0.25
LINC01549A6NIU2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 TRIR-205ENST00000592273 783 ntTSL 3 BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 GRAMD4P4-201ENST00000613563 1115 ntBASIC13.51□□□□□ -0.25
LINC01549A6NIU2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC01549A6NIU2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 UBQLN4P1-201ENST00000461599 1801 ntBASIC13.5□□□□□ -0.25
LINC01549A6NIU2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 NME4-202ENST00000382940 766 ntTSL 3 BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 NME1-207ENST00000480143 964 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 TESC-206ENST00000541210 936 ntTSL 3 BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
LINC01549A6NIU2 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms