Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC66A2RUB6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC66A2RUB6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC66A2RUB6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC66A2RUB6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC66A2RUB6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC66A2RUB6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC66A2RUB6 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC66A2RUB6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC66A2RUB6 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC66A2RUB6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
CCDC66A2RUB6 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCDC66A2RUB6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC66A2RUB6 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC66A2RUB6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC66A2RUB6 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC66A2RUB6 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC66A2RUB6 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
CCDC66A2RUB6 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC66A2RUB6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC66A2RUB6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC66A2RUB6 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC66A2RUB6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC66A2RUB6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC66A2RUB6 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CCDC66A2RUB6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CCDC66A2RUB6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC66A2RUB6 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC66A2RUB6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC66A2RUB6 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC66A2RUB6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC66A2RUB6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
CCDC66A2RUB6 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC66A2RUB6 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC66A2RUB6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC66A2RUB6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
CCDC66A2RUB6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC66A2RUB6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.53■□□□□ 0.88
CCDC66A2RUB6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC66A2RUB6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC66A2RUB6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CCDC66A2RUB6 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC66A2RUB6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC66A2RUB6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC66A2RUB6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC66A2RUB6 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC66A2RUB6 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC66A2RUB6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC66A2RUB6 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CCDC66A2RUB6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC66A2RUB6 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC66A2RUB6 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC66A2RUB6 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC66A2RUB6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC66A2RUB6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CCDC66A2RUB6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC66A2RUB6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC66A2RUB6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC66A2RUB6 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC66A2RUB6 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC66A2RUB6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC66A2RUB6 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC66A2RUB6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC66A2RUB6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC66A2RUB6 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC66A2RUB6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC66A2RUB6 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC66A2RUB6 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC66A2RUB6 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC66A2RUB6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC66A2RUB6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC66A2RUB6 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
CCDC66A2RUB6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC66A2RUB6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.52■□□□□ 0.87
CCDC66A2RUB6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC66A2RUB6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CCDC66A2RUB6 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.51■□□□□ 0.87
CCDC66A2RUB6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
CCDC66A2RUB6 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CCDC66A2RUB6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC66A2RUB6 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC66A2RUB6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC66A2RUB6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC66A2RUB6 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC66A2RUB6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC66A2RUB6 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC66A2RUB6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC66A2RUB6 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC66A2RUB6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC66A2RUB6 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC66A2RUB6 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC66A2RUB6 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.51■□□□□ 0.87
CCDC66A2RUB6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CCDC66A2RUB6 MKRN4P-201ENST00000444706 1521 ntBASIC20.51■□□□□ 0.87
CCDC66A2RUB6 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC66A2RUB6 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC66A2RUB6 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC66A2RUB6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC66A2RUB6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC66A2RUB6 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms