Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AP000523.1-201ENST00000398242 1049 ntBASIC28.13■■■□□ 2.09
HFM1A2PYH4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC28.13■■■□□ 2.09
HFM1A2PYH4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC28.13■■■□□ 2.09
HFM1A2PYH4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC28.13■■■□□ 2.09
HFM1A2PYH4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC28.13■■■□□ 2.09
HFM1A2PYH4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC28.13■■■□□ 2.09
HFM1A2PYH4 AC011558.1-201ENST00000623459 338 ntBASIC28.13■■■□□ 2.09
HFM1A2PYH4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
HFM1A2PYH4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
HFM1A2PYH4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC28.13■■■□□ 2.09
HFM1A2PYH4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
HFM1A2PYH4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
HFM1A2PYH4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC28.13■■■□□ 2.09
HFM1A2PYH4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
HFM1A2PYH4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
HFM1A2PYH4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC28.12■■■□□ 2.09
HFM1A2PYH4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC28.12■■■□□ 2.09
HFM1A2PYH4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
HFM1A2PYH4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC28.12■■■□□ 2.09
HFM1A2PYH4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
HFM1A2PYH4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC28.12■■■□□ 2.09
HFM1A2PYH4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
HFM1A2PYH4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
HFM1A2PYH4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC28.12■■■□□ 2.09
HFM1A2PYH4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
HFM1A2PYH4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC28.12■■■□□ 2.09
HFM1A2PYH4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC28.12■■■□□ 2.09
HFM1A2PYH4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
HFM1A2PYH4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
HFM1A2PYH4 AL049812.1-201ENST00000432563 2267 ntBASIC28.12■■■□□ 2.09
HFM1A2PYH4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC28.12■■■□□ 2.09
HFM1A2PYH4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
HFM1A2PYH4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
HFM1A2PYH4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
HFM1A2PYH4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
HFM1A2PYH4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
HFM1A2PYH4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC28.11■■■□□ 2.09
HFM1A2PYH4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC28.11■■■□□ 2.09
HFM1A2PYH4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
HFM1A2PYH4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
HFM1A2PYH4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
HFM1A2PYH4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
HFM1A2PYH4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC28.11■■■□□ 2.09
HFM1A2PYH4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
HFM1A2PYH4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC28.11■■■□□ 2.09
HFM1A2PYH4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
HFM1A2PYH4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC28.1■■■□□ 2.09
HFM1A2PYH4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC28.1■■■□□ 2.09
HFM1A2PYH4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
HFM1A2PYH4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC28.1■■■□□ 2.09
HFM1A2PYH4 AC008556.1-201ENST00000610908 2040 ntBASIC28.1■■■□□ 2.09
HFM1A2PYH4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC28.1■■■□□ 2.09
HFM1A2PYH4 MTMR9LP-203ENST00000426597 1545 ntBASIC28.1■■■□□ 2.09
HFM1A2PYH4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
HFM1A2PYH4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC28.1■■■□□ 2.09
HFM1A2PYH4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
HFM1A2PYH4 SPDYE15P-201ENST00000424157 909 ntBASIC28.09■■■□□ 2.09
HFM1A2PYH4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC28.09■■■□□ 2.09
HFM1A2PYH4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
HFM1A2PYH4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC28.09■■■□□ 2.09
HFM1A2PYH4 SLC25A24-204ENST00000569674 2357 ntBASIC28.09■■■□□ 2.09
HFM1A2PYH4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC28.09■■■□□ 2.09
HFM1A2PYH4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC28.09■■■□□ 2.09
HFM1A2PYH4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
HFM1A2PYH4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC28.09■■■□□ 2.09
HFM1A2PYH4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
HFM1A2PYH4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC28.09■■■□□ 2.09
HFM1A2PYH4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
HFM1A2PYH4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
HFM1A2PYH4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC28.09■■■□□ 2.09
HFM1A2PYH4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
HFM1A2PYH4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC28.09■■■□□ 2.09
HFM1A2PYH4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC28.09■■■□□ 2.09
HFM1A2PYH4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC28.09■■■□□ 2.09
HFM1A2PYH4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
HFM1A2PYH4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC28.09■■■□□ 2.09
HFM1A2PYH4 TSPY5P-201ENST00000426936 936 ntBASIC28.09■■■□□ 2.09
HFM1A2PYH4 KRT18P38-201ENST00000449496 1282 ntBASIC28.09■■■□□ 2.09
HFM1A2PYH4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC28.09■■■□□ 2.09
HFM1A2PYH4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC28.08■■■□□ 2.09
HFM1A2PYH4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
HFM1A2PYH4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
HFM1A2PYH4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC28.08■■■□□ 2.09
HFM1A2PYH4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
HFM1A2PYH4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
HFM1A2PYH4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
HFM1A2PYH4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
HFM1A2PYH4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
HFM1A2PYH4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
HFM1A2PYH4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC28.08■■■□□ 2.09
HFM1A2PYH4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC28.08■■■□□ 2.09
HFM1A2PYH4 GCSHP2-201ENST00000560971 527 ntBASIC28.08■■■□□ 2.09
HFM1A2PYH4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC28.08■■■□□ 2.09
HFM1A2PYH4 NTF6B-201ENST00000591913 560 ntBASIC28.08■■■□□ 2.09
HFM1A2PYH4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC28.08■■■□□ 2.09
HFM1A2PYH4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC28.08■■■□□ 2.09
HFM1A2PYH4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
HFM1A2PYH4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
HFM1A2PYH4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC28.08■■■□□ 2.08
HFM1A2PYH4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms