Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.73■□□□□ 0.27
TRDV1A0A1B0GX56 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRDV1A0A1B0GX56 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.73■□□□□ 0.27
TRDV1A0A1B0GX56 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.73■□□□□ 0.27
TRDV1A0A1B0GX56 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRDV1A0A1B0GX56 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.73■□□□□ 0.27
TRDV1A0A1B0GX56 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.73■□□□□ 0.27
TRDV1A0A1B0GX56 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRDV1A0A1B0GX56 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRDV1A0A1B0GX56 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRDV1A0A1B0GX56 LINC00896-202ENST00000609602 2128 ntBASIC16.73■□□□□ 0.27
TRDV1A0A1B0GX56 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.73■□□□□ 0.27
TRDV1A0A1B0GX56 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRDV1A0A1B0GX56 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRDV1A0A1B0GX56 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRDV1A0A1B0GX56 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRDV1A0A1B0GX56 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TRDV1A0A1B0GX56 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRDV1A0A1B0GX56 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TRDV1A0A1B0GX56 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRDV1A0A1B0GX56 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
TRDV1A0A1B0GX56 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRDV1A0A1B0GX56 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRDV1A0A1B0GX56 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRDV1A0A1B0GX56 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.72■□□□□ 0.27
TRDV1A0A1B0GX56 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRDV1A0A1B0GX56 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRDV1A0A1B0GX56 AC139713.2-201ENST00000641328 2723 ntBASIC16.72■□□□□ 0.27
TRDV1A0A1B0GX56 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRDV1A0A1B0GX56 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRDV1A0A1B0GX56 GNAS-203ENST00000306120 1878 ntBASIC16.72■□□□□ 0.27
TRDV1A0A1B0GX56 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRDV1A0A1B0GX56 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRDV1A0A1B0GX56 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TRDV1A0A1B0GX56 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRDV1A0A1B0GX56 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.72■□□□□ 0.27
TRDV1A0A1B0GX56 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.72■□□□□ 0.27
TRDV1A0A1B0GX56 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRDV1A0A1B0GX56 AL139246.5-201ENST00000606645 996 ntBASIC16.72■□□□□ 0.27
TRDV1A0A1B0GX56 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRDV1A0A1B0GX56 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
TRDV1A0A1B0GX56 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRDV1A0A1B0GX56 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRDV1A0A1B0GX56 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRDV1A0A1B0GX56 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRDV1A0A1B0GX56 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRDV1A0A1B0GX56 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.72■□□□□ 0.27
TRDV1A0A1B0GX56 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRDV1A0A1B0GX56 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRDV1A0A1B0GX56 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRDV1A0A1B0GX56 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRDV1A0A1B0GX56 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TRDV1A0A1B0GX56 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRDV1A0A1B0GX56 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TRDV1A0A1B0GX56 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.71■□□□□ 0.27
TRDV1A0A1B0GX56 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TRDV1A0A1B0GX56 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
TRDV1A0A1B0GX56 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRDV1A0A1B0GX56 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRDV1A0A1B0GX56 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRDV1A0A1B0GX56 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRDV1A0A1B0GX56 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRDV1A0A1B0GX56 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRDV1A0A1B0GX56 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRDV1A0A1B0GX56 KRT18P11-201ENST00000435214 1283 ntBASIC16.71■□□□□ 0.27
TRDV1A0A1B0GX56 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.71■□□□□ 0.27
TRDV1A0A1B0GX56 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRDV1A0A1B0GX56 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRDV1A0A1B0GX56 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TRDV1A0A1B0GX56 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRDV1A0A1B0GX56 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.71■□□□□ 0.27
TRDV1A0A1B0GX56 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
TRDV1A0A1B0GX56 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRDV1A0A1B0GX56 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRDV1A0A1B0GX56 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRDV1A0A1B0GX56 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.7■□□□□ 0.26
TRDV1A0A1B0GX56 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRDV1A0A1B0GX56 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRDV1A0A1B0GX56 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.7■□□□□ 0.26
TRDV1A0A1B0GX56 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRDV1A0A1B0GX56 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRDV1A0A1B0GX56 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRDV1A0A1B0GX56 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRDV1A0A1B0GX56 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.7■□□□□ 0.26
TRDV1A0A1B0GX56 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRDV1A0A1B0GX56 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.7■□□□□ 0.26
TRDV1A0A1B0GX56 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRDV1A0A1B0GX56 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.7■□□□□ 0.26
TRDV1A0A1B0GX56 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRDV1A0A1B0GX56 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRDV1A0A1B0GX56 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRDV1A0A1B0GX56 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRDV1A0A1B0GX56 SLC25A6P5-201ENST00000435663 894 ntBASIC16.7■□□□□ 0.26
TRDV1A0A1B0GX56 CNN2P6-201ENST00000439038 900 ntBASIC16.7■□□□□ 0.26
TRDV1A0A1B0GX56 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.7■□□□□ 0.26
TRDV1A0A1B0GX56 AC069236.1-201ENST00000604339 616 ntBASIC16.7■□□□□ 0.26
TRDV1A0A1B0GX56 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRDV1A0A1B0GX56 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRDV1A0A1B0GX56 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TRDV1A0A1B0GX56 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms