Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM238LA0A1B0GVL6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC13.31□□□□□ -0.28
TMEM238LA0A1B0GVL6 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC13.31□□□□□ -0.28
TMEM238LA0A1B0GVL6 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC13.31□□□□□ -0.28
TMEM238LA0A1B0GVL6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM238LA0A1B0GVL6 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.31□□□□□ -0.28
TMEM238LA0A1B0GVL6 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM238LA0A1B0GVL6 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM238LA0A1B0GVL6 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM238LA0A1B0GVL6 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM238LA0A1B0GVL6 AL031598.1-201ENST00000561511 1773 ntBASIC13.31□□□□□ -0.28
TMEM238LA0A1B0GVL6 Z92544.1-202ENST00000571933 1220 ntBASIC13.31□□□□□ -0.28
TMEM238LA0A1B0GVL6 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC13.31□□□□□ -0.28
TMEM238LA0A1B0GVL6 MIR6722-201ENST00000617286 78 ntBASIC13.31□□□□□ -0.28
TMEM238LA0A1B0GVL6 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM238LA0A1B0GVL6 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TMEM238LA0A1B0GVL6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM238LA0A1B0GVL6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TMEM238LA0A1B0GVL6 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC13.31□□□□□ -0.28
TMEM238LA0A1B0GVL6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC13.31□□□□□ -0.28
TMEM238LA0A1B0GVL6 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM238LA0A1B0GVL6 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM238LA0A1B0GVL6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM238LA0A1B0GVL6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM238LA0A1B0GVL6 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 AP000845.1-201ENST00000581677 2131 ntBASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 MTX2-204ENST00000443241 799 ntTSL 3 BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 DUX4L9-201ENST00000449051 1259 ntBASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 DPP3P2-201ENST00000416030 1696 ntBASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 DNAJC24-202ENST00000465995 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM238LA0A1B0GVL6 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM238LA0A1B0GVL6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM238LA0A1B0GVL6 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.29□□□□□ -0.28
TMEM238LA0A1B0GVL6 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM238LA0A1B0GVL6 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM238LA0A1B0GVL6 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM238LA0A1B0GVL6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC13.29□□□□□ -0.28
TMEM238LA0A1B0GVL6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
TMEM238LA0A1B0GVL6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM238LA0A1B0GVL6 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM238LA0A1B0GVL6 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM238LA0A1B0GVL6 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM238LA0A1B0GVL6 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM238LA0A1B0GVL6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM238LA0A1B0GVL6 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC13.29□□□□□ -0.28
TMEM238LA0A1B0GVL6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM238LA0A1B0GVL6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM238LA0A1B0GVL6 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TMEM238LA0A1B0GVL6 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM238LA0A1B0GVL6 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
TMEM238LA0A1B0GVL6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM238LA0A1B0GVL6 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM238LA0A1B0GVL6 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.29□□□□□ -0.28
TMEM238LA0A1B0GVL6 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM238LA0A1B0GVL6 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM238LA0A1B0GVL6 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
TMEM238LA0A1B0GVL6 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM238LA0A1B0GVL6 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
TMEM238LA0A1B0GVL6 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.29□□□□□ -0.28
TMEM238LA0A1B0GVL6 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM238LA0A1B0GVL6 AC018695.7-201ENST00000624587 2492 ntBASIC13.29□□□□□ -0.28
TMEM238LA0A1B0GVL6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms