Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 AL121906.2-201ENST00000621597 723 ntBASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC13.44□□□□□ -0.26
TRBV27A0A0K0K1C4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 TSPY21P-201ENST00000433481 731 ntBASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 AC005181.1-201ENST00000604782 1256 ntBASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV27A0A0K0K1C4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 AC126763.1-201ENST00000552015 2118 ntBASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms