Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAV18A0A075B6X5 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRAV18A0A075B6X5 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.36■□□□□ 0.21
TRAV18A0A075B6X5 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAV18A0A075B6X5 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV18A0A075B6X5 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV18A0A075B6X5 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV18A0A075B6X5 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
TRAV18A0A075B6X5 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 FEM1AP3-201ENST00000403722 1741 ntBASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 AC020916.1-201ENST00000587762 1774 ntBASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV18A0A075B6X5 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 AC067852.2-201ENST00000590513 2313 ntBASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 CYP2T1P-201ENST00000432607 1285 ntBASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TRAV18A0A075B6X5 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV18A0A075B6X5 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV18A0A075B6X5 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.21
TRAV18A0A075B6X5 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
TRAV18A0A075B6X5 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV18A0A075B6X5 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV18A0A075B6X5 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.33■□□□□ 0.21
TRAV18A0A075B6X5 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV18A0A075B6X5 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV18A0A075B6X5 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV18A0A075B6X5 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV18A0A075B6X5 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms