Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
H3BM21 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.78□□□□□ -1.64
H3BM21 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.78□□□□□ -1.64
H3BM21 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
H3BM21 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.78□□□□□ -1.64
H3BM21 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.78□□□□□ -1.64
H3BM21 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.78□□□□□ -1.64
H3BM21 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.78□□□□□ -1.64
H3BM21 MAPK10-286ENST00000641208 8747 ntBASIC4.77□□□□□ -1.65
H3BM21 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
H3BM21 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.77□□□□□ -1.65
H3BM21 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.77□□□□□ -1.65
H3BM21 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
H3BM21 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.77□□□□□ -1.65
H3BM21 AC138623.1-201ENST00000418060 216 ntBASIC4.77□□□□□ -1.65
H3BM21 CYCSP49-201ENST00000420810 319 ntBASIC4.77□□□□□ -1.65
H3BM21 Z82209.1-201ENST00000422141 2135 ntBASIC4.77□□□□□ -1.65
H3BM21 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.77□□□□□ -1.65
H3BM21 AL627311.1-201ENST00000431514 115 ntBASIC4.77□□□□□ -1.65
H3BM21 AC091390.1-201ENST00000433904 331 ntBASIC4.77□□□□□ -1.65
H3BM21 RPL12P46-201ENST00000436610 195 ntBASIC4.77□□□□□ -1.65
H3BM21 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.77□□□□□ -1.65
H3BM21 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.77□□□□□ -1.65
H3BM21 AC084851.1-201ENST00000529105 249 ntBASIC4.77□□□□□ -1.65
H3BM21 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.77□□□□□ -1.65
H3BM21 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.77□□□□□ -1.65
H3BM21 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.77□□□□□ -1.65
H3BM21 MIR4284-201ENST00000578924 81 ntBASIC4.77□□□□□ -1.65
H3BM21 AC004467.1-201ENST00000615678 330 ntBASIC4.77□□□□□ -1.65
H3BM21 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.77□□□□□ -1.65
H3BM21 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.77□□□□□ -1.65
H3BM21 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
H3BM21 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
H3BM21 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
H3BM21 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
H3BM21 AC107068.1-201ENST00000563286 4218 ntBASIC4.77□□□□□ -1.65
H3BM21 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
H3BM21 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
H3BM21 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
H3BM21 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
H3BM21 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
H3BM21 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.76□□□□□ -1.65
H3BM21 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
H3BM21 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
H3BM21 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
H3BM21 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
H3BM21 RNU6-766P-201ENST00000362478 107 ntBASIC4.76□□□□□ -1.65
H3BM21 RNU5A-1-201ENST00000362698 116 ntBASIC4.76□□□□□ -1.65
H3BM21 RNU6-801P-201ENST00000364087 105 ntBASIC4.76□□□□□ -1.65
H3BM21 RNU6-1082P-201ENST00000364574 107 ntBASIC4.76□□□□□ -1.65
H3BM21 RNU6-969P-201ENST00000383900 105 ntBASIC4.76□□□□□ -1.65
H3BM21 U8.10-201ENST00000384260 133 ntBASIC4.76□□□□□ -1.65
H3BM21 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
H3BM21 U3.30-201ENST00000391308 210 ntBASIC4.76□□□□□ -1.65
H3BM21 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.76□□□□□ -1.65
H3BM21 AL592291.1-201ENST00000403830 352 ntBASIC4.76□□□□□ -1.65
H3BM21 SSXP9-201ENST00000417503 292 ntBASIC4.76□□□□□ -1.65
H3BM21 RPS27AP12-201ENST00000429552 465 ntBASIC4.76□□□□□ -1.65
H3BM21 AC010095.1-201ENST00000443543 144 ntBASIC4.76□□□□□ -1.65
H3BM21 RPL39P29-201ENST00000447779 157 ntBASIC4.76□□□□□ -1.65
H3BM21 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.76□□□□□ -1.65
H3BM21 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.76□□□□□ -1.65
H3BM21 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
H3BM21 RNU6-927P-201ENST00000516199 100 ntBASIC4.76□□□□□ -1.65
H3BM21 RNU6-561P-201ENST00000516222 102 ntBASIC4.76□□□□□ -1.65
H3BM21 RNU1-6P-201ENST00000516290 144 ntBASIC4.76□□□□□ -1.65
H3BM21 IGKV2D-36-201ENST00000518643 226 ntBASIC4.76□□□□□ -1.65
H3BM21 MIR4716-201ENST00000579628 84 ntBASIC4.76□□□□□ -1.65
H3BM21 RN7SL690P-201ENST00000582087 240 ntBASIC4.76□□□□□ -1.65
H3BM21 AC022726.1-201ENST00000587475 207 ntBASIC4.76□□□□□ -1.65
H3BM21 AC008745.1-201ENST00000604064 271 ntBASIC4.76□□□□□ -1.65
H3BM21 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.76□□□□□ -1.65
H3BM21 MIR4496-201ENST00000635896 61 ntBASIC4.76□□□□□ -1.65
H3BM21 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
H3BM21 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
H3BM21 CENPCP1-201ENST00000533085 2578 ntBASIC4.76□□□□□ -1.65
H3BM21 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
H3BM21 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
H3BM21 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
H3BM21 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
H3BM21 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
H3BM21 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.76□□□□□ -1.65
H3BM21 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
H3BM21 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
H3BM21 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.75□□□□□ -1.65
H3BM21 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
H3BM21 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.75□□□□□ -1.65
H3BM21 MFSD8-216ENST00000641147 4009 ntBASIC4.75□□□□□ -1.65
H3BM21 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.75□□□□□ -1.65
H3BM21 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
H3BM21 AL590240.1-201ENST00000334118 313 ntBASIC4.75□□□□□ -1.65
H3BM21 Y_RNA.114-201ENST00000363265 113 ntBASIC4.75□□□□□ -1.65
H3BM21 RNU6-137P-201ENST00000363680 108 ntBASIC4.75□□□□□ -1.65
H3BM21 Y_RNA.329-201ENST00000365209 107 ntBASIC4.75□□□□□ -1.65
H3BM21 UBBP2-201ENST00000376781 231 ntBASIC4.75□□□□□ -1.65
H3BM21 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
H3BM21 RNU6-820P-201ENST00000384273 107 ntBASIC4.75□□□□□ -1.65
H3BM21 MIR487A-201ENST00000385009 80 ntBASIC4.75□□□□□ -1.65
H3BM21 RNU6-821P-201ENST00000390995 107 ntBASIC4.75□□□□□ -1.65
H3BM21 SNORA26.5-201ENST00000391215 123 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms