RNA–Protein interactions for RNA: ENST00000261349.8

LRP6-201, Transcript of LDL receptor related protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP6, Length 10,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-201ENST00000261349 PELP1Q8IZL8 1130 aaKnown RBP8.15□□□□□ -1.11
LRP6-201ENST00000261349 MYT1Q01538 1121 aa7.95□□□□□ -1.14
LRP6-201ENST00000261349 NISCHQ9Y2I1 1504 aa7.92□□□□□ -1.14
LRP6-201ENST00000261349 HRCP23327 699 aa7.91□□□□□ -1.14
LRP6-201ENST00000261349 PCGF6Q9BYE7 350 aa7.9□□□□□ -1.14
LRP6-201ENST00000261349 SUPT5HO00267 1087 aaKnown RBP7.83□□□□□ -1.16
LRP6-201ENST00000261349 PPARGC1BQ86YN6 1023 aaKnown RBP7.81□□□□□ -1.16
LRP6-201ENST00000261349 SHROOM4Q9ULL8 1493 aa7.74□□□□□ -1.17
LRP6-201ENST00000261349 CENPBP07199 599 aaPredicted RBP7.64□□□□□ -1.19
LRP6-201ENST00000261349 ZEB1P37275 1124 aaPredicted RBP7.59□□□□□ -1.19
LRP6-201ENST00000261349 SCAF1Q9H7N4 1312 aaKnown RBP7.55□□□□□ -1.2
LRP6-201ENST00000261349 YTHDC1Q96MU7 727 aaKnown RBP7.55□□□□□ -1.2
LRP6-201ENST00000261349 EHMT2Q96KQ7 1210 aa7.49□□□□□ -1.21
LRP6-201ENST00000261349 GTF3C3Q9Y5Q9 886 aa7.47□□□□□ -1.21
LRP6-201ENST00000261349 TRIM26Q12899 539 aaPredicted RBP7.46□□□□□ -1.22
LRP6-201ENST00000261349 DCAF8L2P0C7V8 631 aa7.44□□□□□ -1.22
LRP6-201ENST00000261349 ACIN1Q9UKV3 1341 aaKnown RBP7.43□□□□□ -1.22
LRP6-201ENST00000261349 CCER1Q8TC90 406 aaPredicted RBP7.39□□□□□ -1.23
LRP6-201ENST00000261349 CHIC1Q5VXU3 224 aa7.38□□□□□ -1.23
LRP6-201ENST00000261349 TTBK1Q5TCY1 1321 aaPredicted RBP7.37□□□□□ -1.23
LRP6-201ENST00000261349 ERICH6Q7L0X2 663 aa7.34□□□□□ -1.23
LRP6-201ENST00000261349 NEUROD1Q13562 356 aa7.34□□□□□ -1.23
LRP6-201ENST00000261349 FAM9AQ8IZU1 332 aaPredicted RBP7.34□□□□□ -1.24
LRP6-201ENST00000261349 LOC105371045A0A1W2PR82 267 aa7.31□□□□□ -1.24
LRP6-201ENST00000261349 DIEXFQ68CQ4 756 aaKnown RBP7.31□□□□□ -1.24
LRP6-201ENST00000261349 MYO15BQ96JP2 1530 aa7.27□□□□□ -1.25
LRP6-201ENST00000261349 BCL11AQ9H165 835 aa7.26□□□□□ -1.25
LRP6-201ENST00000261349 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.25□□□□□ -1.25
LRP6-201ENST00000261349 DCAF1Q9Y4B6 1507 aa7.25□□□□□ -1.25
LRP6-201ENST00000261349 NEFLP07196 543 aa7.19□□□□□ -1.26
LRP6-201ENST00000261349 CCDC180Q9P1Z9 1646 aa7.18□□□□□ -1.26
LRP6-201ENST00000261349 BCANQ96GW7 911 aa7.17□□□□□ -1.26
LRP6-201ENST00000261349 TRIM41Q8WV44 630 aa7.16□□□□□ -1.26
LRP6-201ENST00000261349 ANP32EQ9BTT0 268 aa7.15□□□□□ -1.26
LRP6-201ENST00000261349 ZNF316A6NFI3 1004 aaPredicted RBP7.06□□□□□ -1.28
LRP6-201ENST00000261349 APLP2Q06481 763 aa7.05□□□□□ -1.28
LRP6-201ENST00000261349 CSRNP3Q8WYN3 585 aa7.03□□□□□ -1.28
LRP6-201ENST00000261349 RTL5Q5HYW3 569 aaPredicted RBP7.02□□□□□ -1.29
LRP6-201ENST00000261349 CLSPNQ9HAW4 1339 aa7.02□□□□□ -1.29
LRP6-201ENST00000261349 PRKCSHP14314 528 aaPredicted RBP7.01□□□□□ -1.29
LRP6-201ENST00000261349 MIER1Q8N108 512 aa6.99□□□□□ -1.29
LRP6-201ENST00000261349 HNRNPUL2Q1KMD3 747 aaKnown RBP6.98□□□□□ -1.29
LRP6-201ENST00000261349 SUPT16HQ9Y5B9 1047 aaKnown RBP6.96□□□□□ -1.3
LRP6-201ENST00000261349 RANGAP1P46060 587 aaPredicted RBP6.95□□□□□ -1.3
LRP6-201ENST00000261349 FKBP8Q14318 412 aa6.93□□□□□ -1.3
LRP6-201ENST00000261349 UBTFP17480 764 aaKnown RBP6.92□□□□□ -1.3
LRP6-201ENST00000261349 EIF5BO60841 1220 aaKnown RBP6.91□□□□□ -1.3
LRP6-201ENST00000261349 TSHZ2Q9NRE2 1034 aa6.91□□□□□ -1.3
LRP6-201ENST00000261349 MYT1LQ9UL68 1186 aa6.9□□□□□ -1.3
LRP6-201ENST00000261349 CDK11AQ9UQ88 783 aaPredicted RBP6.9□□□□□ -1.31
LRP6-201ENST00000261349 NBR1Q14596 966 aa6.9□□□□□ -1.31
LRP6-201ENST00000261349 ITGAEP38570 1179 aa6.88□□□□□ -1.31
LRP6-201ENST00000261349 RTN4Q9NQC3 1192 aaKnown RBP6.85□□□□□ -1.31
LRP6-201ENST00000261349 DEKP35659 375 aaKnown RBP6.84□□□□□ -1.32
LRP6-201ENST00000261349 DAXXQ9UER7 740 aaPredicted RBP6.82□□□□□ -1.32
LRP6-201ENST00000261349 CCDC136Q96JN2 1154 aa6.81□□□□□ -1.32
LRP6-201ENST00000261349 RBM19Q9Y4C8 960 aaKnown RBP6.81□□□□□ -1.32
LRP6-201ENST00000261349 ANP32AP39687 249 aaKnown RBP6.8□□□□□ -1.32
LRP6-201ENST00000261349 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.79□□□□□ -1.32
LRP6-201ENST00000261349 IRX6P78412 446 aaPredicted RBP6.78□□□□□ -1.32
LRP6-201ENST00000261349 TRIM52Q96A61 297 aa6.77□□□□□ -1.33
LRP6-201ENST00000261349 NPM2Q86SE8 214 aaKnown RBP6.76□□□□□ -1.33
LRP6-201ENST00000261349 GLIPR1L2Q4G1C9 344 aa6.76□□□□□ -1.33
LRP6-201ENST00000261349 ANP32CO43423 234 aa6.75□□□□□ -1.33
LRP6-201ENST00000261349 ANO8Q9HCE9 1232 aaPredicted RBP6.74□□□□□ -1.33
LRP6-201ENST00000261349 ZCCHC6Q5VYS8 1495 aaKnown RBP6.74□□□□□ -1.33
LRP6-201ENST00000261349 NOP58Q9Y2X3 529 aaKnown RBP6.72□□□□□ -1.33
LRP6-201ENST00000261349 ERICH6BQ5W0A0 696 aa6.7□□□□□ -1.34
LRP6-201ENST00000261349 CNGB1Q14028 1251 aaPredicted RBP6.7□□□□□ -1.34
LRP6-201ENST00000261349 NEFMP07197 916 aa6.69□□□□□ -1.34
LRP6-201ENST00000261349 HNRNPUQ00839 825 aaKnown RBP eCLIP6.68□□□□□ -1.34
LRP6-201ENST00000261349 ZBTB47Q9UFB7 747 aaPredicted RBP6.68□□□□□ -1.34
LRP6-201ENST00000261349 DDX10Q13206 875 aaKnown RBP6.68□□□□□ -1.34
LRP6-201ENST00000261349 SALL2Q9Y467 1007 aaPredicted RBP6.68□□□□□ -1.34
LRP6-201ENST00000261349 LAS1LQ9Y4W2 734 aaKnown RBP6.68□□□□□ -1.34
LRP6-201ENST00000261349 CEP162Q5TB80 1403 aa6.65□□□□□ -1.34
LRP6-201ENST00000261349 POLR3GLQ9BT43 218 aa6.64□□□□□ -1.35
LRP6-201ENST00000261349 ATP1B4Q9UN42 357 aaPredicted RBP6.62□□□□□ -1.35
LRP6-201ENST00000261349 FANCIQ9NVI1 1328 aa6.61□□□□□ -1.35
LRP6-201ENST00000261349 ARXQ96QS3 562 aa6.61□□□□□ -1.35
LRP6-201ENST00000261349 PKNOX2Q96KN3 472 aa6.61□□□□□ -1.35
LRP6-201ENST00000261349 KCNH8Q96L42 1107 aa6.6□□□□□ -1.35
LRP6-201ENST00000261349 HIRIP3Q9BW71 556 aaPredicted RBP6.59□□□□□ -1.35
LRP6-201ENST00000261349 PPP4R2Q9NY27 417 aa6.59□□□□□ -1.36
LRP6-201ENST00000261349 MSH5O43196 834 aa6.58□□□□□ -1.36
LRP6-201ENST00000261349 IL27Q8NEV9 243 aa6.58□□□□□ -1.36
LRP6-201ENST00000261349 NAP1L5Q96NT1 182 aaPredicted RBP6.57□□□□□ -1.36
LRP6-201ENST00000261349 FAM9BQ8IZU0 186 aa6.57□□□□□ -1.36
LRP6-201ENST00000261349 FAM50AQ14320 339 aaKnown RBP6.57□□□□□ -1.36
LRP6-201ENST00000261349 B4GALNT3Q6L9W6 998 aa6.57□□□□□ -1.36
LRP6-201ENST00000261349 CLIP1P30622 1438 aa6.55□□□□□ -1.36
LRP6-201ENST00000261349 UBE2Q2Q8WVN8 375 aa6.54□□□□□ -1.36
LRP6-201ENST00000261349 PPM1GO15355 546 aaPredicted RBP6.54□□□□□ -1.36
LRP6-201ENST00000261349 VSIG10Q8N0Z9 540 aa6.53□□□□□ -1.36
LRP6-201ENST00000261349 MRS2Q9HD23 443 aa6.53□□□□□ -1.36
LRP6-201ENST00000261349 IPO9Q96P70 1041 aaKnown RBP6.52□□□□□ -1.36
LRP6-201ENST00000261349 TIMELESSQ9UNS1 1208 aa6.52□□□□□ -1.37
LRP6-201ENST00000261349 RSPH6AQ9H0K4 717 aa6.52□□□□□ -1.37
LRP6-201ENST00000261349 TONSLQ96HA7 1378 aa6.52□□□□□ -1.37
LRP6-201ENST00000261349 RB1CC1Q8TDY2 1594 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 176 ms