RNA–Protein interactions for RNA: ENST00000438150.2

ZNF28-203, Transcript of zinc finger protein 28, humanhuman

TSL 2 BASIC

Gene ZNF28, Length 5,171 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-203ENST00000438150 MYT1Q01538 1121 aa8.34□□□□□ -1.07
ZNF28-203ENST00000438150 NISCHQ9Y2I1 1504 aa8.22□□□□□ -1.09
ZNF28-203ENST00000438150 PELP1Q8IZL8 1130 aaKnown RBP8.1□□□□□ -1.11
ZNF28-203ENST00000438150 TTBK1Q5TCY1 1321 aaPredicted RBP7.85□□□□□ -1.15
ZNF28-203ENST00000438150 ERICH6Q7L0X2 663 aa7.79□□□□□ -1.16
ZNF28-203ENST00000438150 SLC24A1O60721 1099 aa7.73□□□□□ -1.17
ZNF28-203ENST00000438150 CCDC180Q9P1Z9 1646 aa7.59□□□□□ -1.19
ZNF28-203ENST00000438150 RANGAP1P46060 587 aaPredicted RBP7.55□□□□□ -1.2
ZNF28-203ENST00000438150 SHROOM4Q9ULL8 1493 aa7.44□□□□□ -1.22
ZNF28-203ENST00000438150 RB1CC1Q8TDY2 1594 aa7.39□□□□□ -1.23
ZNF28-203ENST00000438150 ABCC9O60706 1549 aa7.32□□□□□ -1.24
ZNF28-203ENST00000438150 EHMT2Q96KQ7 1210 aa7.31□□□□□ -1.24
ZNF28-203ENST00000438150 NACADO15069 1562 aa7.3□□□□□ -1.24
ZNF28-203ENST00000438150 MYO15BQ96JP2 1530 aa7.22□□□□□ -1.25
ZNF28-203ENST00000438150 DAXXQ9UER7 740 aaPredicted RBP7.15□□□□□ -1.26
ZNF28-203ENST00000438150 YTHDC1Q96MU7 727 aaKnown RBP7.09□□□□□ -1.27
ZNF28-203ENST00000438150 EIF5BO60841 1220 aaKnown RBP7.07□□□□□ -1.28
ZNF28-203ENST00000438150 CENPBP07199 599 aaPredicted RBP7.04□□□□□ -1.28
ZNF28-203ENST00000438150 DCAF8L2P0C7V8 631 aa7.02□□□□□ -1.29
ZNF28-203ENST00000438150 CUX2O14529 1486 aa6.96□□□□□ -1.29
ZNF28-203ENST00000438150 DCAF1Q9Y4B6 1507 aa6.96□□□□□ -1.3
ZNF28-203ENST00000438150 GLIPR1L2Q4G1C9 344 aa6.95□□□□□ -1.3
ZNF28-203ENST00000438150 CCER1Q8TC90 406 aaPredicted RBP6.95□□□□□ -1.3
ZNF28-203ENST00000438150 CECR2Q9BXF3 1484 aa6.85□□□□□ -1.31
ZNF28-203ENST00000438150 DNAJC5Q9H3Z4 198 aa6.85□□□□□ -1.31
ZNF28-203ENST00000438150 POLR3GLQ9BT43 218 aa6.84□□□□□ -1.31
ZNF28-203ENST00000438150 PRKCSHP14314 528 aaPredicted RBP6.83□□□□□ -1.32
ZNF28-203ENST00000438150 NEFLP07196 543 aa6.83□□□□□ -1.32
ZNF28-203ENST00000438150 AMER1Q5JTC6 1135 aaPredicted RBP6.82□□□□□ -1.32
ZNF28-203ENST00000438150 ERCC6Q03468 1493 aa6.79□□□□□ -1.32
ZNF28-203ENST00000438150 HOMEZQ8IX15 550 aa6.79□□□□□ -1.32
ZNF28-203ENST00000438150 PABPN1Q86U42 306 aaKnown RBP eCLIP6.79□□□□□ -1.32
ZNF28-203ENST00000438150 BAZ1BQ9UIG0 1483 aaKnown RBP6.78□□□□□ -1.32
ZNF28-203ENST00000438150 NCBP3Q53F19 620 aaKnown RBP6.76□□□□□ -1.33
ZNF28-203ENST00000438150 FAM9AQ8IZU1 332 aaPredicted RBP6.74□□□□□ -1.33
ZNF28-203ENST00000438150 ARXQ96QS3 562 aa6.73□□□□□ -1.33
ZNF28-203ENST00000438150 BCL11AQ9H165 835 aa6.73□□□□□ -1.33
ZNF28-203ENST00000438150 PODXL2Q9NZ53 605 aa6.72□□□□□ -1.33
ZNF28-203ENST00000438150 APLP2Q06481 763 aa6.71□□□□□ -1.33
ZNF28-203ENST00000438150 PDS5BQ9NTI5 1447 aa6.7□□□□□ -1.34
ZNF28-203ENST00000438150 SMARCA2P51531 1590 aa6.7□□□□□ -1.34
ZNF28-203ENST00000438150 RTL5Q5HYW3 569 aaPredicted RBP6.7□□□□□ -1.34
ZNF28-203ENST00000438150 RTN4Q9NQC3 1192 aaKnown RBP6.68□□□□□ -1.34
ZNF28-203ENST00000438150 ZNF326Q5BKZ1 582 aaKnown RBP6.66□□□□□ -1.34
ZNF28-203ENST00000438150 MYT1LQ9UL68 1186 aa6.66□□□□□ -1.34
ZNF28-203ENST00000438150 TULP1O00294 542 aaPredicted RBP6.66□□□□□ -1.34
ZNF28-203ENST00000438150 CLSPNQ9HAW4 1339 aa6.65□□□□□ -1.34
ZNF28-203ENST00000438150 EIF4G1Q04637 1599 aaKnown RBP6.65□□□□□ -1.35
ZNF28-203ENST00000438150 CDK11BP21127 795 aaKnown RBP6.65□□□□□ -1.35
ZNF28-203ENST00000438150 CDK11AQ9UQ88 783 aaPredicted RBP6.65□□□□□ -1.35
ZNF28-203ENST00000438150 AEBP2Q6ZN18 517 aaPredicted RBP6.64□□□□□ -1.35
ZNF28-203ENST00000438150 C14orf37Q86TY3 774 aa6.64□□□□□ -1.35
ZNF28-203ENST00000438150 CC2D2AQ9P2K1 1620 aa6.64□□□□□ -1.35
ZNF28-203ENST00000438150 HMGB1P09429 215 aaKnown RBP6.61□□□□□ -1.35
ZNF28-203ENST00000438150 ZCCHC6Q5VYS8 1495 aaKnown RBP6.6□□□□□ -1.35
ZNF28-203ENST00000438150 HAP1P54257 671 aaPredicted RBP6.6□□□□□ -1.35
ZNF28-203ENST00000438150 BCANQ96GW7 911 aa6.6□□□□□ -1.35
ZNF28-203ENST00000438150 NPM2Q86SE8 214 aaKnown RBP6.59□□□□□ -1.35
ZNF28-203ENST00000438150 SCRIBQ14160 1630 aa6.59□□□□□ -1.35
ZNF28-203ENST00000438150 HMGXB3Q12766 1538 aa6.59□□□□□ -1.35
ZNF28-203ENST00000438150 ABCC8Q09428 1581 aa6.58□□□□□ -1.36
ZNF28-203ENST00000438150 NCAPD3P42695 1498 aa6.58□□□□□ -1.36
ZNF28-203ENST00000438150 LAMC3Q9Y6N6 1575 aa6.56□□□□□ -1.36
ZNF28-203ENST00000438150 ZEB1P37275 1124 aaPredicted RBP6.54□□□□□ -1.36
ZNF28-203ENST00000438150 TPRNQ4KMQ1 711 aa6.54□□□□□ -1.36
ZNF28-203ENST00000438150 PLPPR3Q6T4P5 718 aa6.53□□□□□ -1.36
ZNF28-203ENST00000438150 DNAJC5BQ9UF47 199 aa6.53□□□□□ -1.36
ZNF28-203ENST00000438150 OSCARQ8IYS5 282 aa6.52□□□□□ -1.37
ZNF28-203ENST00000438150 BICRAQ9NZM4 1560 aa6.51□□□□□ -1.37
ZNF28-203ENST00000438150 NCLP19338 710 aaKnown RBP6.5□□□□□ -1.37
ZNF28-203ENST00000438150 PTMSP20962 102 aa6.49□□□□□ -1.37
ZNF28-203ENST00000438150 BAZ1AQ9NRL2 1556 aaPredicted RBP6.48□□□□□ -1.37
ZNF28-203ENST00000438150 MRC2Q9UBG0 1479 aa6.48□□□□□ -1.37
ZNF28-203ENST00000438150 CHIC1Q5VXU3 224 aa6.47□□□□□ -1.37
ZNF28-203ENST00000438150 PKNOX2Q96KN3 472 aa6.46□□□□□ -1.38
ZNF28-203ENST00000438150 WDR97A6NE52 1622 aa6.45□□□□□ -1.38
ZNF28-203ENST00000438150 PDE4CQ08493 712 aa6.44□□□□□ -1.38
ZNF28-203ENST00000438150 NPM1P06748 294 aaKnown RBP eCLIP6.42□□□□□ -1.38
ZNF28-203ENST00000438150 CEP164Q9UPV0 1460 aa6.41□□□□□ -1.38
ZNF28-203ENST00000438150 ANP32EQ9BTT0 268 aa6.41□□□□□ -1.38
ZNF28-203ENST00000438150 UNC13AQ9UPW8 1703 aa6.4□□□□□ -1.39
ZNF28-203ENST00000438150 PDIA4P13667 645 aaKnown RBP6.4□□□□□ -1.39
ZNF28-203ENST00000438150 TNNT2P45379 298 aaPredicted RBP6.4□□□□□ -1.39
ZNF28-203ENST00000438150 TRIM41Q8WV44 630 aa6.4□□□□□ -1.39
ZNF28-203ENST00000438150 RSF1Q96T23 1441 aaPredicted RBP6.39□□□□□ -1.39
ZNF28-203ENST00000438150 TIMELESSQ9UNS1 1208 aa6.39□□□□□ -1.39
ZNF28-203ENST00000438150 IFT140Q96RY7 1462 aa6.38□□□□□ -1.39
ZNF28-203ENST00000438150 A0A0U1RQG5 324 aaPredicted RBP6.38□□□□□ -1.39
ZNF28-203ENST00000438150 NAP1L5Q96NT1 182 aaPredicted RBP6.38□□□□□ -1.39
ZNF28-203ENST00000438150 CADPSQ9ULU8 1353 aa6.38□□□□□ -1.39
ZNF28-203ENST00000438150 TAOK2Q9UL54 1235 aa6.38□□□□□ -1.39
ZNF28-203ENST00000438150 ARID4BQ4LE39 1312 aaPredicted RBP6.38□□□□□ -1.39
ZNF28-203ENST00000438150 HRCP23327 699 aa6.37□□□□□ -1.39
ZNF28-203ENST00000438150 GTF3C3Q9Y5Q9 886 aa6.37□□□□□ -1.39
ZNF28-203ENST00000438150 ATAD2BQ9ULI0 1458 aa6.36□□□□□ -1.39
ZNF28-203ENST00000438150 FBXO3Q9UK99 471 aa6.36□□□□□ -1.39
ZNF28-203ENST00000438150 HSP90B1P14625 803 aaKnown RBP6.35□□□□□ -1.39
ZNF28-203ENST00000438150 ZNF316A6NFI3 1004 aaPredicted RBP6.35□□□□□ -1.39
ZNF28-203ENST00000438150 FOXD1Q16676 465 aa6.35□□□□□ -1.39
ZNF28-203ENST00000438150 TAF7LQ5H9L4 462 aa6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms