RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 MYT1Q01538 1121 aa8.34□□□□□ -1.07
SYNE2-203ENST00000357395 PELP1Q8IZL8 1130 aaKnown RBP8.09□□□□□ -1.11
SYNE2-203ENST00000357395 TTBK1Q5TCY1 1321 aaPredicted RBP7.8□□□□□ -1.16
SYNE2-203ENST00000357395 YTHDC1Q96MU7 727 aaKnown RBP7.56□□□□□ -1.2
SYNE2-203ENST00000357395 CCER1Q8TC90 406 aaPredicted RBP7.48□□□□□ -1.21
SYNE2-203ENST00000357395 ZEB1P37275 1124 aaPredicted RBP7.37□□□□□ -1.23
SYNE2-203ENST00000357395 CENPBP07199 599 aaPredicted RBP7.3□□□□□ -1.24
SYNE2-203ENST00000357395 ERICH6Q7L0X2 663 aa7.29□□□□□ -1.24
SYNE2-203ENST00000357395 MYT1LQ9UL68 1186 aa7.15□□□□□ -1.26
SYNE2-203ENST00000357395 CLSPNQ9HAW4 1339 aa7.13□□□□□ -1.27
SYNE2-203ENST00000357395 GLIPR1L2Q4G1C9 344 aa6.95□□□□□ -1.3
SYNE2-203ENST00000357395 NEFLP07196 543 aa6.95□□□□□ -1.3
SYNE2-203ENST00000357395 FAM9AQ8IZU1 332 aaPredicted RBP6.92□□□□□ -1.3
SYNE2-203ENST00000357395 EHMT2Q96KQ7 1210 aa6.88□□□□□ -1.31
SYNE2-203ENST00000357395 RANGAP1P46060 587 aaPredicted RBP6.87□□□□□ -1.31
SYNE2-203ENST00000357395 PCGF6Q9BYE7 350 aa6.86□□□□□ -1.31
SYNE2-203ENST00000357395 RTL5Q5HYW3 569 aaPredicted RBP6.81□□□□□ -1.32
SYNE2-203ENST00000357395 DAXXQ9UER7 740 aaPredicted RBP6.8□□□□□ -1.32
SYNE2-203ENST00000357395 HRCP23327 699 aa6.8□□□□□ -1.32
SYNE2-203ENST00000357395 APLP2Q06481 763 aa6.79□□□□□ -1.32
SYNE2-203ENST00000357395 SUPT5HO00267 1087 aaKnown RBP6.76□□□□□ -1.33
SYNE2-203ENST00000357395 NCLP19338 710 aaKnown RBP6.72□□□□□ -1.33
SYNE2-203ENST00000357395 ARID4BQ4LE39 1312 aaPredicted RBP6.68□□□□□ -1.34
SYNE2-203ENST00000357395 DCAF8L2P0C7V8 631 aa6.68□□□□□ -1.34
SYNE2-203ENST00000357395 ANP32EQ9BTT0 268 aa6.67□□□□□ -1.34
SYNE2-203ENST00000357395 TRIM26Q12899 539 aaPredicted RBP6.65□□□□□ -1.34
SYNE2-203ENST00000357395 NISCHQ9Y2I1 1504 aa6.64□□□□□ -1.35
SYNE2-203ENST00000357395 TNNT2P45379 298 aaPredicted RBP6.6□□□□□ -1.35
SYNE2-203ENST00000357395 ANP32BQ92688 251 aaKnown RBP6.59□□□□□ -1.35
SYNE2-203ENST00000357395 EIF5BO60841 1220 aaKnown RBP6.59□□□□□ -1.35
SYNE2-203ENST00000357395 ZNF316A6NFI3 1004 aaPredicted RBP6.58□□□□□ -1.36
SYNE2-203ENST00000357395 POLR3GLQ9BT43 218 aa6.55□□□□□ -1.36
SYNE2-203ENST00000357395 TRIM44Q96DX7 344 aaPredicted RBP6.55□□□□□ -1.36
SYNE2-203ENST00000357395 ACIN1Q9UKV3 1341 aaKnown RBP6.55□□□□□ -1.36
SYNE2-203ENST00000357395 ERICH6BQ5W0A0 696 aa6.53□□□□□ -1.36
SYNE2-203ENST00000357395 ZNF326Q5BKZ1 582 aaKnown RBP6.51□□□□□ -1.37
SYNE2-203ENST00000357395 ANP32AP39687 249 aaKnown RBP6.5□□□□□ -1.37
SYNE2-203ENST00000357395 CDK11AQ9UQ88 783 aaPredicted RBP6.5□□□□□ -1.37
SYNE2-203ENST00000357395 PTMSP20962 102 aa6.49□□□□□ -1.37
SYNE2-203ENST00000357395 NEUROD1Q13562 356 aa6.49□□□□□ -1.37
SYNE2-203ENST00000357395 GTF3C3Q9Y5Q9 886 aa6.47□□□□□ -1.37
SYNE2-203ENST00000357395 DIEXFQ68CQ4 756 aaKnown RBP6.47□□□□□ -1.37
SYNE2-203ENST00000357395 SHROOM4Q9ULL8 1493 aa6.45□□□□□ -1.38
SYNE2-203ENST00000357395 LAS1LQ9Y4W2 734 aaKnown RBP6.41□□□□□ -1.38
SYNE2-203ENST00000357395 NEFMP07197 916 aa6.41□□□□□ -1.38
SYNE2-203ENST00000357395 SLC24A1O60721 1099 aa6.41□□□□□ -1.38
SYNE2-203ENST00000357395 PPARGC1BQ86YN6 1023 aaKnown RBP6.4□□□□□ -1.39
SYNE2-203ENST00000357395 DDRGK1Q96HY6 314 aa6.37□□□□□ -1.39
SYNE2-203ENST00000357395 HMGB1P09429 215 aaKnown RBP6.36□□□□□ -1.39
SYNE2-203ENST00000357395 TRIM41Q8WV44 630 aa6.35□□□□□ -1.39
SYNE2-203ENST00000357395 UPF2Q9HAU5 1272 aaKnown RBP6.35□□□□□ -1.39
SYNE2-203ENST00000357395 CALRP27797 417 aaKnown RBP6.34□□□□□ -1.39
SYNE2-203ENST00000357395 USP35Q9P2H5 1018 aa6.34□□□□□ -1.4
SYNE2-203ENST00000357395 DCAF1Q9Y4B6 1507 aa6.32□□□□□ -1.4
SYNE2-203ENST00000357395 CDK11BP21127 795 aaKnown RBP6.31□□□□□ -1.4
SYNE2-203ENST00000357395 ANP32CO43423 234 aa6.3□□□□□ -1.4
SYNE2-203ENST00000357395 CFAP44Q96MT7 982 aa6.29□□□□□ -1.4
SYNE2-203ENST00000357395 MTERF4Q7Z6M4 381 aaKnown RBP6.29□□□□□ -1.4
SYNE2-203ENST00000357395 PPM1GO15355 546 aaPredicted RBP6.28□□□□□ -1.4
SYNE2-203ENST00000357395 ZBTB47Q9UFB7 747 aaPredicted RBP6.27□□□□□ -1.4
SYNE2-203ENST00000357395 GOLGA6L22H0YM25 854 aa6.27□□□□□ -1.41
SYNE2-203ENST00000357395 SCAF1Q9H7N4 1312 aaKnown RBP6.27□□□□□ -1.41
SYNE2-203ENST00000357395 BECN1Q14457 450 aa6.27□□□□□ -1.41
SYNE2-203ENST00000357395 A0A0U1RQG5 324 aaPredicted RBP6.26□□□□□ -1.41
SYNE2-203ENST00000357395 L1TD1Q5T7N2 865 aaKnown RBP6.26□□□□□ -1.41
SYNE2-203ENST00000357395 RSPH6AQ9H0K4 717 aa6.25□□□□□ -1.41
SYNE2-203ENST00000357395 BCL11AQ9H165 835 aa6.25□□□□□ -1.41
SYNE2-203ENST00000357395 PNNQ9H307 717 aaKnown RBP6.25□□□□□ -1.41
SYNE2-203ENST00000357395 UBTFP17480 764 aaKnown RBP6.23□□□□□ -1.41
SYNE2-203ENST00000357395 NRDCO43847 1150 aa6.22□□□□□ -1.41
SYNE2-203ENST00000357395 CHIC1Q5VXU3 224 aa6.22□□□□□ -1.41
SYNE2-203ENST00000357395 GOLGA6L3A6NEY3 463 aa6.21□□□□□ -1.42
SYNE2-203ENST00000357395 CHAF1AQ13111 956 aaPredicted RBP6.21□□□□□ -1.42
SYNE2-203ENST00000357395 MAP7D2Q96T17 732 aa6.21□□□□□ -1.42
SYNE2-203ENST00000357395 TAF3Q5VWG9 929 aa6.21□□□□□ -1.42
SYNE2-203ENST00000357395 LOC105371045A0A1W2PR82 267 aa6.2□□□□□ -1.42
SYNE2-203ENST00000357395 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.2□□□□□ -1.42
SYNE2-203ENST00000357395 PKNOX2Q96KN3 472 aa6.2□□□□□ -1.42
SYNE2-203ENST00000357395 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.17□□□□□ -1.42
SYNE2-203ENST00000357395 CNGB1Q14028 1251 aaPredicted RBP6.17□□□□□ -1.42
SYNE2-203ENST00000357395 BCANQ96GW7 911 aa6.17□□□□□ -1.42
SYNE2-203ENST00000357395 GOLGA6L6A8MZA4 724 aa6.17□□□□□ -1.42
SYNE2-203ENST00000357395 TIMELESSQ9UNS1 1208 aa6.15□□□□□ -1.43
SYNE2-203ENST00000357395 CHMP4BQ9H444 224 aaKnown RBP6.15□□□□□ -1.43
SYNE2-203ENST00000357395 HSP90AA1P07900 732 aaKnown RBP6.14□□□□□ -1.43
SYNE2-203ENST00000357395 ISY1Q9ULR0 285 aaKnown RBP6.12□□□□□ -1.43
SYNE2-203ENST00000357395 HAP1P54257 671 aaPredicted RBP6.11□□□□□ -1.43
SYNE2-203ENST00000357395 FKBP8Q14318 412 aa6.11□□□□□ -1.43
SYNE2-203ENST00000357395 GOLGA6L1Q8N7Z2 621 aa6.1□□□□□ -1.43
SYNE2-203ENST00000357395 HMGB1P1B2RPK0 211 aaPredicted RBP6.1□□□□□ -1.43
SYNE2-203ENST00000357395 CCDC180Q9P1Z9 1646 aa6.09□□□□□ -1.43
SYNE2-203ENST00000357395 NBR1Q14596 966 aa6.09□□□□□ -1.43
SYNE2-203ENST00000357395 SETQ01105 290 aaPredicted RBP6.09□□□□□ -1.43
SYNE2-203ENST00000357395 ATP1B4Q9UN42 357 aaPredicted RBP6.09□□□□□ -1.43
SYNE2-203ENST00000357395 HNRNPUL2Q1KMD3 747 aaKnown RBP6.08□□□□□ -1.44
SYNE2-203ENST00000357395 CASC1Q6TDU7 716 aa6.07□□□□□ -1.44
SYNE2-203ENST00000357395 PHF14O94880 888 aa6.07□□□□□ -1.44
SYNE2-203ENST00000357395 TSPYL1Q9H0U9 437 aa6.07□□□□□ -1.44
SYNE2-203ENST00000357395 MS4A1P11836 297 aa6.07□□□□□ -1.44
SYNE2-203ENST00000357395 TNNT3P45378 269 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms