RNA–Protein interactions for RNA: ENST00000447779.1

RPL39P29-201, Transcript of ribosomal protein L39 pseudogene 29, humanhuman

BASIC

Gene RPL39P29, Length 157 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P29-201ENST00000447779 AEBP2Q6ZN18 517 aaPredicted RBP13.91□□□□□ -0.18
RPL39P29-201ENST00000447779 CHIC1Q5VXU3 224 aa13.08□□□□□ -0.32
RPL39P29-201ENST00000447779 SENP3Q9H4L4 574 aaPredicted RBP11.86□□□□□ -0.51
RPL39P29-201ENST00000447779 PHF23Q9BUL5 403 aaPredicted RBP11.69□□□□□ -0.54
RPL39P29-201ENST00000447779 FOXD1Q16676 465 aa11.08□□□□□ -0.64
RPL39P29-201ENST00000447779 MSH5O43196 834 aa10.4□□□□□ -0.74
RPL39P29-201ENST00000447779 POTEDQ86YR6 584 aa10.38□□□□□ -0.75
RPL39P29-201ENST00000447779 PLPPR3Q6T4P5 718 aa10.37□□□□□ -0.75
RPL39P29-201ENST00000447779 PIAS4Q8N2W9 510 aaPredicted RBP10.27□□□□□ -0.77
RPL39P29-201ENST00000447779 PPP6R1Q9UPN7 881 aa10.27□□□□□ -0.77
RPL39P29-201ENST00000447779 ADRA2BP18089 450 aa10.2□□□□□ -0.78
RPL39P29-201ENST00000447779 MAPK8IP2Q13387 824 aaPredicted RBP9.41□□□□□ -0.9
RPL39P29-201ENST00000447779 DMRT2Q9Y5R5 561 aa9.4□□□□□ -0.9
RPL39P29-201ENST00000447779 SCAF1Q9H7N4 1312 aaKnown RBP9.31□□□□□ -0.92
RPL39P29-201ENST00000447779 PPP4R3CPQ6ZMV5 832 aa9.07□□□□□ -0.96
RPL39P29-201ENST00000447779 HOXD11P31277 338 aaPredicted RBP9.03□□□□□ -0.96
RPL39P29-201ENST00000447779 CACNB1Q02641 598 aaPredicted RBP8.97□□□□□ -0.97
RPL39P29-201ENST00000447779 CNKSR2Q8WXI2 1034 aa8.94□□□□□ -0.98
RPL39P29-201ENST00000447779 DCAF8L1A6NGE4 600 aa8.9□□□□□ -0.98
RPL39P29-201ENST00000447779 RNF39Q9H2S5 420 aa8.9□□□□□ -0.98
RPL39P29-201ENST00000447779 RNF216Q9NWF9 866 aaPredicted RBP8.9□□□□□ -0.98
RPL39P29-201ENST00000447779 DNAJC5BQ9UF47 199 aa8.79□□□□□ -1
RPL39P29-201ENST00000447779 C1QBPQ07021 282 aaKnown RBP8.74□□□□□ -1.01
RPL39P29-201ENST00000447779 NCBP3Q53F19 620 aaKnown RBP8.66□□□□□ -1.02
RPL39P29-201ENST00000447779 NPM3O75607 178 aaKnown RBP8.56□□□□□ -1.04
RPL39P29-201ENST00000447779 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.52□□□□□ -1.05
RPL39P29-201ENST00000447779 KCNA4P22459 653 aa8.41□□□□□ -1.06
RPL39P29-201ENST00000447779 U3KPZ7 1027 aaPredicted RBP8.38□□□□□ -1.07
RPL39P29-201ENST00000447779 DSG3P32926 999 aa8.28□□□□□ -1.08
RPL39P29-201ENST00000447779 SPINK5Q9NQ38 1064 aaPredicted RBP8.27□□□□□ -1.09
RPL39P29-201ENST00000447779 SLC4A2P04920 1241 aa8.24□□□□□ -1.09
RPL39P29-201ENST00000447779 CAPN15O75808 1086 aa8.22□□□□□ -1.09
RPL39P29-201ENST00000447779 POTEHQ6S545 545 aa8.1□□□□□ -1.11
RPL39P29-201ENST00000447779 APLP2Q06481 763 aa8.09□□□□□ -1.11
RPL39P29-201ENST00000447779 ZNF219Q9P2Y4 722 aaPredicted RBP8.08□□□□□ -1.12
RPL39P29-201ENST00000447779 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.06□□□□□ -1.12
RPL39P29-201ENST00000447779 TRHP20396 242 aaPredicted RBP8.06□□□□□ -1.12
RPL39P29-201ENST00000447779 HNRNPUL2Q1KMD3 747 aaKnown RBP8.06□□□□□ -1.12
RPL39P29-201ENST00000447779 SLC4A1APQ9BWU0 796 aaKnown RBP8.06□□□□□ -1.12
RPL39P29-201ENST00000447779 ABCB7O75027 752 aa8.02□□□□□ -1.13
RPL39P29-201ENST00000447779 SAMD1Q6SPF0 538 aaPredicted RBP8.02□□□□□ -1.13
RPL39P29-201ENST00000447779 EHMT2Q96KQ7 1210 aa8.01□□□□□ -1.13
RPL39P29-201ENST00000447779 MYCNP04198 464 aaPredicted RBP7.91□□□□□ -1.14
RPL39P29-201ENST00000447779 CSRNP3Q8WYN3 585 aa7.87□□□□□ -1.15
RPL39P29-201ENST00000447779 RBM42Q9BTD8 480 aaKnown RBP7.87□□□□□ -1.15
RPL39P29-201ENST00000447779 POLA2Q14181 598 aa7.84□□□□□ -1.15
RPL39P29-201ENST00000447779 FOXD4L1Q9NU39 408 aa7.76□□□□□ -1.17
RPL39P29-201ENST00000447779 CHRDL2Q6WN34 429 aa7.75□□□□□ -1.17
RPL39P29-201ENST00000447779 ATF5Q9Y2D1 282 aaPredicted RBP7.75□□□□□ -1.17
RPL39P29-201ENST00000447779 ZBTB22O15209 634 aa7.74□□□□□ -1.17
RPL39P29-201ENST00000447779 AKT1S1Q96B36 256 aa7.68□□□□□ -1.18
RPL39P29-201ENST00000447779 ZBTB12Q9Y330 459 aaPredicted RBP7.68□□□□□ -1.18
RPL39P29-201ENST00000447779 REM2Q8IYK8 340 aaPredicted RBP7.6□□□□□ -1.19
RPL39P29-201ENST00000447779 OSCARQ8IYS5 282 aa7.59□□□□□ -1.19
RPL39P29-201ENST00000447779 ATXN8OSP0DMR3 200 aa7.57□□□□□ -1.2
RPL39P29-201ENST00000447779 PIP4P2Q8N4L2 257 aa7.55□□□□□ -1.2
RPL39P29-201ENST00000447779 SP7Q8TDD2 431 aaPredicted RBP7.53□□□□□ -1.2
RPL39P29-201ENST00000447779 PITPNM1O00562 1244 aa7.51□□□□□ -1.21
RPL39P29-201ENST00000447779 FXR2P51116 673 aaKnown RBP eCLIP7.51□□□□□ -1.21
RPL39P29-201ENST00000447779 SPDYE2BA6NHP3 402 aa7.45□□□□□ -1.22
RPL39P29-201ENST00000447779 SPDYE6P0CI01 402 aa7.45□□□□□ -1.22
RPL39P29-201ENST00000447779 SPDYE2Q495Y8 402 aa7.45□□□□□ -1.22
RPL39P29-201ENST00000447779 HAX1O00165 279 aa7.4□□□□□ -1.22
RPL39P29-201ENST00000447779 FBLN2P98095 1184 aa7.4□□□□□ -1.22
RPL39P29-201ENST00000447779 MKRN4PQ13434 485 aaPredicted RBP7.4□□□□□ -1.22
RPL39P29-201ENST00000447779 SSUH2Q9Y2M2 353 aa7.37□□□□□ -1.23
RPL39P29-201ENST00000447779 EVX2Q03828 476 aa7.36□□□□□ -1.23
RPL39P29-201ENST00000447779 SPDYE1Q8NFV5 336 aaPredicted RBP7.33□□□□□ -1.24
RPL39P29-201ENST00000447779 ZNF692Q9BU19 519 aaPredicted RBP7.31□□□□□ -1.24
RPL39P29-201ENST00000447779 PRKAR2AP13861 404 aaKnown RBP7.3□□□□□ -1.24
RPL39P29-201ENST00000447779 C19orf67A6NJJ6 358 aa7.27□□□□□ -1.25
RPL39P29-201ENST00000447779 CLEC11AQ9Y240 323 aa7.27□□□□□ -1.25
RPL39P29-201ENST00000447779 PABPN1Q86U42 306 aaKnown RBP eCLIP7.2□□□□□ -1.26
RPL39P29-201ENST00000447779 GABBR2O75899 941 aa7.18□□□□□ -1.26
RPL39P29-201ENST00000447779 CHADLQ6NUI6 762 aa7.18□□□□□ -1.26
RPL39P29-201ENST00000447779 PRR29P0C7W0 189 aa7.17□□□□□ -1.26
RPL39P29-201ENST00000447779 FARP1Q9Y4F1 1045 aaPredicted RBP7.09□□□□□ -1.27
RPL39P29-201ENST00000447779 FKBP8Q14318 412 aa7.08□□□□□ -1.28
RPL39P29-201ENST00000447779 POTEIP0CG38 1075 aa7.05□□□□□ -1.28
RPL39P29-201ENST00000447779 CD44P16070 742 aaKnown RBP7.05□□□□□ -1.28
RPL39P29-201ENST00000447779 CLCN6P51797 869 aa7.05□□□□□ -1.28
RPL39P29-201ENST00000447779 LHX8Q68G74 356 aa7.05□□□□□ -1.28
RPL39P29-201ENST00000447779 CREBZFQ9NS37 354 aa7□□□□□ -1.29
RPL39P29-201ENST00000447779 STAG3Q9UJ98 1225 aa6.99□□□□□ -1.29
RPL39P29-201ENST00000447779 ZNF579Q8NAF0 562 aaKnown RBP6.98□□□□□ -1.29
RPL39P29-201ENST00000447779 SPDYE4A6NLX3 237 aa6.94□□□□□ -1.3
RPL39P29-201ENST00000447779 ZRANB1Q9UGI0 708 aa6.93□□□□□ -1.3
RPL39P29-201ENST00000447779 MNX1P50219 401 aaPredicted RBP6.9□□□□□ -1.3
RPL39P29-201ENST00000447779 DCBLD2Q96PD2 775 aa6.9□□□□□ -1.3
RPL39P29-201ENST00000447779 GALR2O43603 387 aaPredicted RBP6.88□□□□□ -1.31
RPL39P29-201ENST00000447779 PROM2Q8N271 834 aa6.84□□□□□ -1.31
RPL39P29-201ENST00000447779 NPM1P06748 294 aaKnown RBP eCLIP6.83□□□□□ -1.32
RPL39P29-201ENST00000447779 AMER1Q5JTC6 1135 aaPredicted RBP6.83□□□□□ -1.32
RPL39P29-201ENST00000447779 PHF12Q96QT6 1004 aa6.83□□□□□ -1.32
RPL39P29-201ENST00000447779 PAK3O75914 559 aaPredicted RBP6.82□□□□□ -1.32
RPL39P29-201ENST00000447779 FBXO3Q9UK99 471 aa6.82□□□□□ -1.32
RPL39P29-201ENST00000447779 POTEB2H3BUK9 544 aa6.81□□□□□ -1.32
RPL39P29-201ENST00000447779 OTUD5Q96G74 571 aa6.8□□□□□ -1.32
RPL39P29-201ENST00000447779 PELP1Q8IZL8 1130 aaKnown RBP6.79□□□□□ -1.32
RPL39P29-201ENST00000447779 RTN4Q9NQC3 1192 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms