RNA–Protein interactions for RNA: ENST00000516222.1

RNU6-561P-201, Transcript of RNA, U6 small nuclear 561, pseudogene, humanhuman

BASIC

Gene RNU6-561P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-561P-201ENST00000516222 AEBP2Q6ZN18 517 aaPredicted RBP13.57□□□□□ -0.24
RNU6-561P-201ENST00000516222 CHIC1Q5VXU3 224 aa12.88□□□□□ -0.35
RNU6-561P-201ENST00000516222 SENP3Q9H4L4 574 aaPredicted RBP11.77□□□□□ -0.53
RNU6-561P-201ENST00000516222 PHF23Q9BUL5 403 aaPredicted RBP11.55□□□□□ -0.56
RNU6-561P-201ENST00000516222 FOXD1Q16676 465 aa10.88□□□□□ -0.67
RNU6-561P-201ENST00000516222 MSH5O43196 834 aa10.36□□□□□ -0.75
RNU6-561P-201ENST00000516222 PLPPR3Q6T4P5 718 aa10.31□□□□□ -0.76
RNU6-561P-201ENST00000516222 PIAS4Q8N2W9 510 aaPredicted RBP10.21□□□□□ -0.77
RNU6-561P-201ENST00000516222 POTEDQ86YR6 584 aa10.2□□□□□ -0.78
RNU6-561P-201ENST00000516222 ADRA2BP18089 450 aa10.04□□□□□ -0.8
RNU6-561P-201ENST00000516222 PPP6R1Q9UPN7 881 aa10.03□□□□□ -0.8
RNU6-561P-201ENST00000516222 SCAF1Q9H7N4 1312 aaKnown RBP9.38□□□□□ -0.91
RNU6-561P-201ENST00000516222 DMRT2Q9Y5R5 561 aa9.26□□□□□ -0.93
RNU6-561P-201ENST00000516222 MAPK8IP2Q13387 824 aaPredicted RBP9.23□□□□□ -0.93
RNU6-561P-201ENST00000516222 DCAF8L1A6NGE4 600 aa8.98□□□□□ -0.97
RNU6-561P-201ENST00000516222 PPP4R3CPQ6ZMV5 832 aa8.97□□□□□ -0.97
RNU6-561P-201ENST00000516222 CACNB1Q02641 598 aaPredicted RBP8.96□□□□□ -0.98
RNU6-561P-201ENST00000516222 CNKSR2Q8WXI2 1034 aa8.87□□□□□ -0.99
RNU6-561P-201ENST00000516222 HOXD11P31277 338 aaPredicted RBP8.86□□□□□ -0.99
RNU6-561P-201ENST00000516222 RNF216Q9NWF9 866 aaPredicted RBP8.81□□□□□ -1
RNU6-561P-201ENST00000516222 RNF39Q9H2S5 420 aa8.74□□□□□ -1.01
RNU6-561P-201ENST00000516222 NCBP3Q53F19 620 aaKnown RBP8.71□□□□□ -1.02
RNU6-561P-201ENST00000516222 C1QBPQ07021 282 aaKnown RBP8.69□□□□□ -1.02
RNU6-561P-201ENST00000516222 DNAJC5BQ9UF47 199 aa8.64□□□□□ -1.03
RNU6-561P-201ENST00000516222 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.54□□□□□ -1.04
RNU6-561P-201ENST00000516222 NPM3O75607 178 aaKnown RBP8.43□□□□□ -1.06
RNU6-561P-201ENST00000516222 CAPN15O75808 1086 aa8.24□□□□□ -1.09
RNU6-561P-201ENST00000516222 U3KPZ7 1027 aaPredicted RBP8.22□□□□□ -1.09
RNU6-561P-201ENST00000516222 APLP2Q06481 763 aa8.21□□□□□ -1.1
RNU6-561P-201ENST00000516222 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.14□□□□□ -1.11
RNU6-561P-201ENST00000516222 KCNA4P22459 653 aa8.14□□□□□ -1.11
RNU6-561P-201ENST00000516222 DSG3P32926 999 aa8.14□□□□□ -1.11
RNU6-561P-201ENST00000516222 HNRNPUL2Q1KMD3 747 aaKnown RBP8.14□□□□□ -1.11
RNU6-561P-201ENST00000516222 SPINK5Q9NQ38 1064 aaPredicted RBP8.13□□□□□ -1.11
RNU6-561P-201ENST00000516222 ZNF219Q9P2Y4 722 aaPredicted RBP8.08□□□□□ -1.12
RNU6-561P-201ENST00000516222 TRHP20396 242 aaPredicted RBP8.07□□□□□ -1.12
RNU6-561P-201ENST00000516222 SAMD1Q6SPF0 538 aaPredicted RBP8.04□□□□□ -1.12
RNU6-561P-201ENST00000516222 SLC4A2P04920 1241 aa8.03□□□□□ -1.12
RNU6-561P-201ENST00000516222 POTEHQ6S545 545 aa8.02□□□□□ -1.13
RNU6-561P-201ENST00000516222 ABCB7O75027 752 aa7.97□□□□□ -1.13
RNU6-561P-201ENST00000516222 RBM42Q9BTD8 480 aaKnown RBP7.9□□□□□ -1.14
RNU6-561P-201ENST00000516222 MYCNP04198 464 aaPredicted RBP7.87□□□□□ -1.15
RNU6-561P-201ENST00000516222 POLA2Q14181 598 aa7.81□□□□□ -1.16
RNU6-561P-201ENST00000516222 SLC4A1APQ9BWU0 796 aaKnown RBP7.74□□□□□ -1.17
RNU6-561P-201ENST00000516222 ZBTB12Q9Y330 459 aaPredicted RBP7.73□□□□□ -1.17
RNU6-561P-201ENST00000516222 FOXD4L1Q9NU39 408 aa7.7□□□□□ -1.18
RNU6-561P-201ENST00000516222 CHRDL2Q6WN34 429 aa7.69□□□□□ -1.18
RNU6-561P-201ENST00000516222 AKT1S1Q96B36 256 aa7.64□□□□□ -1.19
RNU6-561P-201ENST00000516222 ATF5Q9Y2D1 282 aaPredicted RBP7.56□□□□□ -1.2
RNU6-561P-201ENST00000516222 REM2Q8IYK8 340 aaPredicted RBP7.53□□□□□ -1.2
RNU6-561P-201ENST00000516222 ATXN8OSP0DMR3 200 aa7.52□□□□□ -1.21
RNU6-561P-201ENST00000516222 OSCARQ8IYS5 282 aa7.51□□□□□ -1.21
RNU6-561P-201ENST00000516222 FBLN2P98095 1184 aa7.49□□□□□ -1.21
RNU6-561P-201ENST00000516222 SP7Q8TDD2 431 aaPredicted RBP7.46□□□□□ -1.22
RNU6-561P-201ENST00000516222 HAX1O00165 279 aa7.44□□□□□ -1.22
RNU6-561P-201ENST00000516222 PIP4P2Q8N4L2 257 aa7.44□□□□□ -1.22
RNU6-561P-201ENST00000516222 SPDYE2BA6NHP3 402 aa7.42□□□□□ -1.22
RNU6-561P-201ENST00000516222 PITPNM1O00562 1244 aa7.42□□□□□ -1.22
RNU6-561P-201ENST00000516222 SPDYE6P0CI01 402 aa7.42□□□□□ -1.22
RNU6-561P-201ENST00000516222 SPDYE2Q495Y8 402 aa7.42□□□□□ -1.22
RNU6-561P-201ENST00000516222 ZBTB22O15209 634 aa7.4□□□□□ -1.22
RNU6-561P-201ENST00000516222 FXR2P51116 673 aaKnown RBP eCLIP7.39□□□□□ -1.23
RNU6-561P-201ENST00000516222 SPDYE1Q8NFV5 336 aaPredicted RBP7.35□□□□□ -1.23
RNU6-561P-201ENST00000516222 ZNF692Q9BU19 519 aaPredicted RBP7.33□□□□□ -1.24
RNU6-561P-201ENST00000516222 CLEC11AQ9Y240 323 aa7.33□□□□□ -1.24
RNU6-561P-201ENST00000516222 PRKAR2AP13861 404 aaKnown RBP7.28□□□□□ -1.24
RNU6-561P-201ENST00000516222 SSUH2Q9Y2M2 353 aa7.23□□□□□ -1.25
RNU6-561P-201ENST00000516222 MKRN4PQ13434 485 aaPredicted RBP7.22□□□□□ -1.25
RNU6-561P-201ENST00000516222 PRR29P0C7W0 189 aa7.21□□□□□ -1.26
RNU6-561P-201ENST00000516222 PABPN1Q86U42 306 aaKnown RBP eCLIP7.18□□□□□ -1.26
RNU6-561P-201ENST00000516222 EVX2Q03828 476 aa7.16□□□□□ -1.26
RNU6-561P-201ENST00000516222 C19orf67A6NJJ6 358 aa7.15□□□□□ -1.26
RNU6-561P-201ENST00000516222 CHADLQ6NUI6 762 aa7.11□□□□□ -1.27
RNU6-561P-201ENST00000516222 GABBR2O75899 941 aa7.09□□□□□ -1.27
RNU6-561P-201ENST00000516222 CLCN6P51797 869 aa7.09□□□□□ -1.27
RNU6-561P-201ENST00000516222 STAG3Q9UJ98 1225 aa7.06□□□□□ -1.28
RNU6-561P-201ENST00000516222 FARP1Q9Y4F1 1045 aaPredicted RBP7.05□□□□□ -1.28
RNU6-561P-201ENST00000516222 CD44P16070 742 aaKnown RBP7.04□□□□□ -1.28
RNU6-561P-201ENST00000516222 LHX8Q68G74 356 aa7.02□□□□□ -1.29
RNU6-561P-201ENST00000516222 CSRNP3Q8WYN3 585 aa7.02□□□□□ -1.29
RNU6-561P-201ENST00000516222 DCBLD2Q96PD2 775 aa6.98□□□□□ -1.29
RNU6-561P-201ENST00000516222 PAK3O75914 559 aaPredicted RBP6.96□□□□□ -1.3
RNU6-561P-201ENST00000516222 ZRANB1Q9UGI0 708 aa6.94□□□□□ -1.3
RNU6-561P-201ENST00000516222 SPDYE4A6NLX3 237 aa6.93□□□□□ -1.3
RNU6-561P-201ENST00000516222 NPM1P06748 294 aaKnown RBP eCLIP6.92□□□□□ -1.3
RNU6-561P-201ENST00000516222 EHMT2Q96KQ7 1210 aa6.92□□□□□ -1.3
RNU6-561P-201ENST00000516222 ZNF579Q8NAF0 562 aaKnown RBP6.9□□□□□ -1.3
RNU6-561P-201ENST00000516222 CREBZFQ9NS37 354 aa6.89□□□□□ -1.31
RNU6-561P-201ENST00000516222 POTEIP0CG38 1075 aa6.85□□□□□ -1.31
RNU6-561P-201ENST00000516222 PLEKHG5O94827 1062 aa6.81□□□□□ -1.32
RNU6-561P-201ENST00000516222 GALR2O43603 387 aaPredicted RBP6.79□□□□□ -1.32
RNU6-561P-201ENST00000516222 PHF12Q96QT6 1004 aa6.75□□□□□ -1.33
RNU6-561P-201ENST00000516222 MNX1P50219 401 aaPredicted RBP6.72□□□□□ -1.33
RNU6-561P-201ENST00000516222 C7P10643 843 aa6.71□□□□□ -1.34
RNU6-561P-201ENST00000516222 MAMSTRQ6ZN01 415 aa6.7□□□□□ -1.34
RNU6-561P-201ENST00000516222 MIER1Q8N108 512 aa6.7□□□□□ -1.34
RNU6-561P-201ENST00000516222 SLC39A7Q92504 469 aa6.7□□□□□ -1.34
RNU6-561P-201ENST00000516222 TSPYL2Q9H2G4 693 aaPredicted RBP6.7□□□□□ -1.34
RNU6-561P-201ENST00000516222 PLSCR2Q9NRY7 297 aa6.7□□□□□ -1.34
RNU6-561P-201ENST00000516222 ASTLQ6HA08 431 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms