RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 CHIC1Q5VXU3 224 aa13.08□□□□□ -0.31
APAF1-208ENST00000549007 AEBP2Q6ZN18 517 aaPredicted RBP13.07□□□□□ -0.32
APAF1-208ENST00000549007 PHF23Q9BUL5 403 aaPredicted RBP11.71□□□□□ -0.54
APAF1-208ENST00000549007 PLPPR3Q6T4P5 718 aa10.81□□□□□ -0.68
APAF1-208ENST00000549007 SENP3Q9H4L4 574 aaPredicted RBP10.79□□□□□ -0.68
APAF1-208ENST00000549007 ADRA2BP18089 450 aa10.39□□□□□ -0.75
APAF1-208ENST00000549007 PPP6R1Q9UPN7 881 aa10.24□□□□□ -0.77
APAF1-208ENST00000549007 EHMT2Q96KQ7 1210 aa10.2□□□□□ -0.78
APAF1-208ENST00000549007 KCNA4P22459 653 aa10.16□□□□□ -0.78
APAF1-208ENST00000549007 FOXD1Q16676 465 aa10.11□□□□□ -0.79
APAF1-208ENST00000549007 CSRNP3Q8WYN3 585 aa9.7□□□□□ -0.86
APAF1-208ENST00000549007 PPP4R3CPQ6ZMV5 832 aa9.68□□□□□ -0.86
APAF1-208ENST00000549007 PIAS4Q8N2W9 510 aaPredicted RBP9.67□□□□□ -0.86
APAF1-208ENST00000549007 SLC4A1APQ9BWU0 796 aaKnown RBP9.67□□□□□ -0.86
APAF1-208ENST00000549007 NPM3O75607 178 aaKnown RBP9.47□□□□□ -0.89
APAF1-208ENST00000549007 NCBP3Q53F19 620 aaKnown RBP9.41□□□□□ -0.9
APAF1-208ENST00000549007 ZBTB22O15209 634 aa9.4□□□□□ -0.9
APAF1-208ENST00000549007 MAPK8IP2Q13387 824 aaPredicted RBP9.19□□□□□ -0.94
APAF1-208ENST00000549007 CNKSR2Q8WXI2 1034 aa9.19□□□□□ -0.94
APAF1-208ENST00000549007 SCAF1Q9H7N4 1312 aaKnown RBP9.06□□□□□ -0.96
APAF1-208ENST00000549007 FOXD4L1Q9NU39 408 aa9.04□□□□□ -0.96
APAF1-208ENST00000549007 RTN4Q9NQC3 1192 aaKnown RBP8.96□□□□□ -0.98
APAF1-208ENST00000549007 MSH5O43196 834 aa8.92□□□□□ -0.98
APAF1-208ENST00000549007 RNF216Q9NWF9 866 aaPredicted RBP8.87□□□□□ -0.99
APAF1-208ENST00000549007 SLC4A2P04920 1241 aa8.84□□□□□ -0.99
APAF1-208ENST00000549007 SLC24A1O60721 1099 aa8.82□□□□□ -1
APAF1-208ENST00000549007 FKBP8Q14318 412 aa8.76□□□□□ -1.01
APAF1-208ENST00000549007 DNAJC5BQ9UF47 199 aa8.76□□□□□ -1.01
APAF1-208ENST00000549007 DMRT2Q9Y5R5 561 aa8.71□□□□□ -1.02
APAF1-208ENST00000549007 HOXD11P31277 338 aaPredicted RBP8.7□□□□□ -1.02
APAF1-208ENST00000549007 AMER1Q5JTC6 1135 aaPredicted RBP8.7□□□□□ -1.02
APAF1-208ENST00000549007 MYCNP04198 464 aaPredicted RBP8.61□□□□□ -1.03
APAF1-208ENST00000549007 ATF5Q9Y2D1 282 aaPredicted RBP8.59□□□□□ -1.03
APAF1-208ENST00000549007 DCAF8L1A6NGE4 600 aa8.54□□□□□ -1.04
APAF1-208ENST00000549007 ATXN8OSP0DMR3 200 aa8.51□□□□□ -1.05
APAF1-208ENST00000549007 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.41□□□□□ -1.062e-12■■■■■ 39
APAF1-208ENST00000549007 NISCHQ9Y2I1 1504 aa8.36□□□□□ -1.07
APAF1-208ENST00000549007 U3KPZ7 1027 aaPredicted RBP8.36□□□□□ -1.07
APAF1-208ENST00000549007 SAMD1Q6SPF0 538 aaPredicted RBP8.24□□□□□ -1.09
APAF1-208ENST00000549007 ZNF219Q9P2Y4 722 aaPredicted RBP8.22□□□□□ -1.09
APAF1-208ENST00000549007 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.19□□□□□ -1.1
APAF1-208ENST00000549007 HNRNPUL2Q1KMD3 747 aaKnown RBP8.19□□□□□ -1.1
APAF1-208ENST00000549007 DCAF8L2P0C7V8 631 aa8.18□□□□□ -1.1
APAF1-208ENST00000549007 MKRN4PQ13434 485 aaPredicted RBP8.17□□□□□ -1.1
APAF1-208ENST00000549007 SPDYE4A6NLX3 237 aa8.17□□□□□ -1.1
APAF1-208ENST00000549007 PLCB2Q00722 1185 aa8.11□□□□□ -1.11
APAF1-208ENST00000549007 VASPP50552 380 aaPredicted RBP8.09□□□□□ -1.11
APAF1-208ENST00000549007 HAP1P54257 671 aaPredicted RBP8.09□□□□□ -1.11
APAF1-208ENST00000549007 IFNLR1Q8IU57 520 aaPredicted RBP8.09□□□□□ -1.11
APAF1-208ENST00000549007 TRHP20396 242 aaPredicted RBP8.08□□□□□ -1.12
APAF1-208ENST00000549007 SPINK5Q9NQ38 1064 aaPredicted RBP8.08□□□□□ -1.12
APAF1-208ENST00000549007 FBXO3Q9UK99 471 aa8.06□□□□□ -1.12
APAF1-208ENST00000549007 PRKCSHP14314 528 aaPredicted RBP8.05□□□□□ -1.12
APAF1-208ENST00000549007 POLA2Q14181 598 aa8.02□□□□□ -1.13
APAF1-208ENST00000549007 PKD2Q13563 968 aa8.01□□□□□ -1.13
APAF1-208ENST00000549007 PROM2Q8N271 834 aa7.98□□□□□ -1.13
APAF1-208ENST00000549007 CAPN15O75808 1086 aa7.95□□□□□ -1.14
APAF1-208ENST00000549007 FBLN2P98095 1184 aa7.95□□□□□ -1.14
APAF1-208ENST00000549007 ABCB7O75027 752 aa7.94□□□□□ -1.14
APAF1-208ENST00000549007 APLP2Q06481 763 aa7.9□□□□□ -1.14
APAF1-208ENST00000549007 NPM1P06748 294 aaKnown RBP eCLIP7.88□□□□□ -1.15
APAF1-208ENST00000549007 KLHL34Q8N239 644 aa7.88□□□□□ -1.15
APAF1-208ENST00000549007 KDM2AQ9Y2K7 1162 aa7.87□□□□□ -1.15
APAF1-208ENST00000549007 CFAP44Q96MT7 982 aa7.86□□□□□ -1.15
APAF1-208ENST00000549007 PAXIP1Q6ZW49 1069 aaPredicted RBP7.85□□□□□ -1.15
APAF1-208ENST00000549007 TAOK2Q9UL54 1235 aa7.84□□□□□ -1.15
APAF1-208ENST00000549007 BCANQ96GW7 911 aa7.84□□□□□ -1.15
APAF1-208ENST00000549007 ECM2O94769 699 aaPredicted RBP7.84□□□□□ -1.15
APAF1-208ENST00000549007 RGL2O15211 777 aa7.82□□□□□ -1.16
APAF1-208ENST00000549007 TPRNQ4KMQ1 711 aa7.8□□□□□ -1.16
APAF1-208ENST00000549007 RNF39Q9H2S5 420 aa7.79□□□□□ -1.16
APAF1-208ENST00000549007 OSCARQ8IYS5 282 aa7.77□□□□□ -1.17
APAF1-208ENST00000549007 VSIG10Q8N0Z9 540 aa7.77□□□□□ -1.17
APAF1-208ENST00000549007 SPOCK2Q92563 424 aa7.77□□□□□ -1.17
APAF1-208ENST00000549007 PLCD3Q8N3E9 789 aa7.77□□□□□ -1.17
APAF1-208ENST00000549007 TSHZ2Q9NRE2 1034 aa7.76□□□□□ -1.17
APAF1-208ENST00000549007 ZNF692Q9BU19 519 aaPredicted RBP7.75□□□□□ -1.17
APAF1-208ENST00000549007 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.75□□□□□ -1.17
APAF1-208ENST00000549007 BBXQ8WY36 941 aaPredicted RBP7.73□□□□□ -1.17
APAF1-208ENST00000549007 MIER1Q8N108 512 aa7.72□□□□□ -1.17
APAF1-208ENST00000549007 CIZ1Q9ULV3 898 aaPredicted RBP7.71□□□□□ -1.17
APAF1-208ENST00000549007 PABPN1Q86U42 306 aaKnown RBP eCLIP7.71□□□□□ -1.18
APAF1-208ENST00000549007 CHGAP10645 457 aaKnown RBP7.71□□□□□ -1.18
APAF1-208ENST00000549007 SPRYD3Q8NCJ5 442 aa7.66□□□□□ -1.18
APAF1-208ENST00000549007 ZBTB12Q9Y330 459 aaPredicted RBP7.65□□□□□ -1.18
APAF1-208ENST00000549007 DSG3P32926 999 aa7.64□□□□□ -1.19
APAF1-208ENST00000549007 C1QBPQ07021 282 aaKnown RBP7.63□□□□□ -1.19
APAF1-208ENST00000549007 SSUH2Q9Y2M2 353 aa7.62□□□□□ -1.19
APAF1-208ENST00000549007 RNF25Q96BH1 459 aaPredicted RBP7.59□□□□□ -1.19
APAF1-208ENST00000549007 STAG3Q9UJ98 1225 aa7.59□□□□□ -1.19
APAF1-208ENST00000549007 SPDYE2BA6NHP3 402 aa7.58□□□□□ -1.2
APAF1-208ENST00000549007 SPDYE6P0CI01 402 aa7.58□□□□□ -1.2
APAF1-208ENST00000549007 SPDYE2Q495Y8 402 aa7.58□□□□□ -1.2
APAF1-208ENST00000549007 NKX1-1Q15270 411 aaPredicted RBP7.53□□□□□ -1.2
APAF1-208ENST00000549007 NBR1Q14596 966 aa7.51□□□□□ -1.21
APAF1-208ENST00000549007 HS6ST3Q8IZP7 471 aa7.48□□□□□ -1.21
APAF1-208ENST00000549007 PLEKHG5O94827 1062 aa7.47□□□□□ -1.21
APAF1-208ENST00000549007 STK25O00506 426 aa7.44□□□□□ -1.22
APAF1-208ENST00000549007 DCAF8Q5TAQ9 597 aa7.44□□□□□ -1.22
APAF1-208ENST00000549007 TIMELESSQ9UNS1 1208 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms