Protein–RNA interactions for Protein: Q9BYQ6

KRTAP4-11, Keratin-associated protein 4-11, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-11Q9BYQ6 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 RNA5SP388-201ENST00000362584 119 ntBASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 Y_RNA.69-201ENST00000362885 109 ntBASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 SNORA10B-201ENST00000384458 133 ntBASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 MIR493-201ENST00000385254 89 ntBASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 U8.16-201ENST00000391279 133 ntBASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 FO393413.1-201ENST00000402892 195 ntBASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 SNORD100-201ENST00000408573 76 ntBASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 SNORA11-201ENST00000408789 128 ntBASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 AC099782.1-201ENST00000425889 474 ntBASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 COX4I1P2-201ENST00000447446 547 ntBASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 AL357127.1-201ENST00000451295 438 ntTSL 3 BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 RN7SL775P-201ENST00000498361 336 ntBASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 ATP6V1G1P6-201ENST00000504007 334 ntBASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 MIR514B-201ENST00000516774 80 ntBASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 RN7SL366P-201ENST00000577957 292 ntBASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 AC244505.7-201ENST00000599675 272 ntBASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 SMIM12P1-201ENST00000603004 274 ntBASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 AC008608.1-201ENST00000603910 127 ntBASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 AL162431.4-201ENST00000604674 411 ntBASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 MRPL57P3-201ENST00000619218 176 ntBASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 LIMCH1-215ENST00000512632 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 TPP2-202ENST00000376065 3931 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 GNA12-203ENST00000407904 3918 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 TTC21A-205ENST00000440121 3941 ntAPPRIS P3 TSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 FTSJ3-201ENST00000427159 3559 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 AC004014.2-201ENST00000623718 5122 ntBASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 LPAL2-203ENST00000454031 2498 ntBASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 CLIP1-218ENST00000545889 4633 ntTSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 AL031595.3-201ENST00000624919 14262 ntBASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 PRDM9-201ENST00000296682 3691 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 USP32P1-202ENST00000393005 3846 ntTSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 KCNH7-202ENST00000332142 4113 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 IGSF22-205ENST00000513874 4284 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 TTC3P1-201ENST00000399586 6081 ntBASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 SLIT3-202ENST00000404867 8903 ntTSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 NCOA4-207ENST00000585132 3489 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 ABCB1-210ENST00000543898 4524 ntTSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 ZNF322-201ENST00000415922 4817 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-11Q9BYQ6 SLC11A2-203ENST00000394904 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 HEATR4-202ENST00000553558 3523 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 SLC9A6-207ENST00000636092 4697 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 MAPK10-357ENST00000641831 2858 ntBASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 EPN2-204ENST00000395620 3860 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 OSBPL3-202ENST00000396429 2707 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 ADA2-204ENST00000399839 3986 ntAPPRIS P3 TSL 5 BASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 MBP-206ENST00000397863 4800 ntTSL 3 BASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 RNU4-58P-201ENST00000363192 141 ntBASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 Y_RNA.250-201ENST00000364542 110 ntBASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 RNA5SP510-201ENST00000364697 99 ntBASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 RNU6-53P-201ENST00000365367 106 ntBASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 RNU6-945P-201ENST00000383947 107 ntBASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 MIR29B1-201ENST00000385015 81 ntBASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 MIR329-2-201ENST00000385029 84 ntBASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 U8.13-201ENST00000390842 128 ntBASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 AL034345.1-201ENST00000407768 123 ntBASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 AL121578.2-201ENST00000448797 447 ntBASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 AC021074.2-201ENST00000468434 172 ntBASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 RNA5SP271-201ENST00000516700 88 ntBASIC1.95□□□□□ -2.1
KRTAP4-11Q9BYQ6 RNU6-965P-201ENST00000516721 96 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms