RNA–Protein interactions for RNA: ENST00000404867.7

SLIT3-202, Transcript of slit guidance ligand 3, humanhuman

TSL 5 BASIC

Gene SLIT3, Length 8,903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-202ENST00000404867 NISCHQ9Y2I1 1504 aa15.46■□□□□ 0.07
SLIT3-202ENST00000404867 PELP1Q8IZL8 1130 aaKnown RBP15.46■□□□□ 0.06
SLIT3-202ENST00000404867 MYT1Q01538 1121 aa15.25■□□□□ 0.03
SLIT3-202ENST00000404867 CCER1Q8TC90 406 aaPredicted RBP14.62□□□□□ -0.07
SLIT3-202ENST00000404867 CENPBP07199 599 aaPredicted RBP14.35□□□□□ -0.11
SLIT3-202ENST00000404867 DCAF8L2P0C7V8 631 aa14.35□□□□□ -0.11
SLIT3-202ENST00000404867 ZEB1P37275 1124 aaPredicted RBP14.34□□□□□ -0.11
SLIT3-202ENST00000404867 YTHDC1Q96MU7 727 aaKnown RBP14.33□□□□□ -0.11
SLIT3-202ENST00000404867 ERICH6Q7L0X2 663 aa14.24□□□□□ -0.13
SLIT3-202ENST00000404867 APLP2Q06481 763 aa14.06□□□□□ -0.16
SLIT3-202ENST00000404867 FAM9AQ8IZU1 332 aaPredicted RBP14.02□□□□□ -0.16
SLIT3-202ENST00000404867 TTBK1Q5TCY1 1321 aaPredicted RBP13.99□□□□□ -0.17
SLIT3-202ENST00000404867 NEFLP07196 543 aa13.92□□□□□ -0.18
SLIT3-202ENST00000404867 SUPT5HO00267 1087 aaKnown RBP13.77□□□□□ -0.21
SLIT3-202ENST00000404867 CCDC180Q9P1Z9 1646 aa13.68□□□□□ -0.22
SLIT3-202ENST00000404867 DAXXQ9UER7 740 aaPredicted RBP13.64□□□□□ -0.23
SLIT3-202ENST00000404867 SHROOM4Q9ULL8 1493 aa13.48□□□□□ -0.25
SLIT3-202ENST00000404867 PCGF6Q9BYE7 350 aa13.46□□□□□ -0.26
SLIT3-202ENST00000404867 RTL5Q5HYW3 569 aaPredicted RBP13.44□□□□□ -0.26
SLIT3-202ENST00000404867 CLSPNQ9HAW4 1339 aa13.39□□□□□ -0.27
SLIT3-202ENST00000404867 MYT1LQ9UL68 1186 aa13.39□□□□□ -0.27
SLIT3-202ENST00000404867 GLIPR1L2Q4G1C9 344 aa13.27□□□□□ -0.29
SLIT3-202ENST00000404867 TRIM26Q12899 539 aaPredicted RBP13.27□□□□□ -0.29
SLIT3-202ENST00000404867 ZNF316A6NFI3 1004 aaPredicted RBP13.24□□□□□ -0.29
SLIT3-202ENST00000404867 TRIM41Q8WV44 630 aa13.17□□□□□ -0.3
SLIT3-202ENST00000404867 HRCP23327 699 aa13.17□□□□□ -0.3
SLIT3-202ENST00000404867 UBTFP17480 764 aaKnown RBP12.96□□□□□ -0.33
SLIT3-202ENST00000404867 ANP32BQ92688 251 aaKnown RBP12.94□□□□□ -0.34
SLIT3-202ENST00000404867 CDK11AQ9UQ88 783 aaPredicted RBP12.92□□□□□ -0.34
SLIT3-202ENST00000404867 ZCCHC6Q5VYS8 1495 aaKnown RBP12.9□□□□□ -0.34
SLIT3-202ENST00000404867 ANP32AP39687 249 aaKnown RBP12.85□□□□□ -0.35
SLIT3-202ENST00000404867 DIEXFQ68CQ4 756 aaKnown RBP12.85□□□□□ -0.35
SLIT3-202ENST00000404867 EHMT2Q96KQ7 1210 aa12.85□□□□□ -0.35
SLIT3-202ENST00000404867 NACADO15069 1562 aa12.84□□□□□ -0.35
SLIT3-202ENST00000404867 RB1CC1Q8TDY2 1594 aa12.84□□□□□ -0.35
SLIT3-202ENST00000404867 NEFMP07197 916 aa12.83□□□□□ -0.35
SLIT3-202ENST00000404867 DCAF1Q9Y4B6 1507 aa12.81□□□□□ -0.36
SLIT3-202ENST00000404867 ZBTB47Q9UFB7 747 aaPredicted RBP12.79□□□□□ -0.36
SLIT3-202ENST00000404867 ANP32EQ9BTT0 268 aa12.76□□□□□ -0.37
SLIT3-202ENST00000404867 ACIN1Q9UKV3 1341 aaKnown RBP12.73□□□□□ -0.37
SLIT3-202ENST00000404867 ANP32CO43423 234 aa12.68□□□□□ -0.38
SLIT3-202ENST00000404867 ATP1B4Q9UN42 357 aaPredicted RBP12.68□□□□□ -0.38
SLIT3-202ENST00000404867 EIF5BO60841 1220 aaKnown RBP12.68□□□□□ -0.38
SLIT3-202ENST00000404867 TNNT2P45379 298 aaPredicted RBP12.67□□□□□ -0.38
SLIT3-202ENST00000404867 UPF2Q9HAU5 1272 aaKnown RBP12.66□□□□□ -0.38
SLIT3-202ENST00000404867 ABCC9O60706 1549 aa12.61□□□□□ -0.39
SLIT3-202ENST00000404867 MYO15BQ96JP2 1530 aa12.6□□□□□ -0.39
SLIT3-202ENST00000404867 SCRIBQ14160 1630 aa12.6□□□□□ -0.39
SLIT3-202ENST00000404867 NCLP19338 710 aaKnown RBP12.58□□□□□ -0.4
SLIT3-202ENST00000404867 TRIM44Q96DX7 344 aaPredicted RBP12.58□□□□□ -0.4
SLIT3-202ENST00000404867 GTF3C3Q9Y5Q9 886 aa12.56□□□□□ -0.4
SLIT3-202ENST00000404867 EEA1Q15075 1411 aa12.55□□□□□ -0.4
SLIT3-202ENST00000404867 CHIC1Q5VXU3 224 aa12.52□□□□□ -0.41
SLIT3-202ENST00000404867 CANXP27824 592 aaKnown RBP12.48□□□□□ -0.41
SLIT3-202ENST00000404867 HSP90AA1P07900 732 aaKnown RBP12.46□□□□□ -0.41
SLIT3-202ENST00000404867 DDRGK1Q96HY6 314 aa12.45□□□□□ -0.42
SLIT3-202ENST00000404867 RANGAP1P46060 587 aaPredicted RBP12.44□□□□□ -0.42
SLIT3-202ENST00000404867 BAZ1AQ9NRL2 1556 aaPredicted RBP12.43□□□□□ -0.42
SLIT3-202ENST00000404867 ERICH6BQ5W0A0 696 aa12.42□□□□□ -0.42
SLIT3-202ENST00000404867 POLR3GLQ9BT43 218 aa12.41□□□□□ -0.42
SLIT3-202ENST00000404867 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.41□□□□□ -0.42
SLIT3-202ENST00000404867 ARID4BQ4LE39 1312 aaPredicted RBP12.4□□□□□ -0.42
SLIT3-202ENST00000404867 BECN1Q14457 450 aa12.39□□□□□ -0.43
SLIT3-202ENST00000404867 GOLGA6L22H0YM25 854 aa12.36□□□□□ -0.43
SLIT3-202ENST00000404867 NEUROD1Q13562 356 aa12.33□□□□□ -0.44
SLIT3-202ENST00000404867 HNRNPUL2Q1KMD3 747 aaKnown RBP12.33□□□□□ -0.44
SLIT3-202ENST00000404867 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.32□□□□□ -0.44
SLIT3-202ENST00000404867 CDK11BP21127 795 aaKnown RBP12.31□□□□□ -0.44
SLIT3-202ENST00000404867 SMARCA2P51531 1590 aa12.28□□□□□ -0.44
SLIT3-202ENST00000404867 SLC4A1APQ9BWU0 796 aaKnown RBP12.28□□□□□ -0.44
SLIT3-202ENST00000404867 PPM1GO15355 546 aaPredicted RBP12.27□□□□□ -0.45
SLIT3-202ENST00000404867 ITGAEP38570 1179 aa12.25□□□□□ -0.45
SLIT3-202ENST00000404867 GOLGA6L6A8MZA4 724 aa12.24□□□□□ -0.45
SLIT3-202ENST00000404867 NRDCO43847 1150 aa12.24□□□□□ -0.45
SLIT3-202ENST00000404867 PTMSP20962 102 aa12.22□□□□□ -0.45
SLIT3-202ENST00000404867 BAZ1BQ9UIG0 1483 aaKnown RBP12.21□□□□□ -0.46
SLIT3-202ENST00000404867 L1TD1Q5T7N2 865 aaKnown RBP12.2□□□□□ -0.46
SLIT3-202ENST00000404867 CFAP44Q96MT7 982 aa12.2□□□□□ -0.46
SLIT3-202ENST00000404867 MYH16Q9H6N6 1097 aa12.2□□□□□ -0.46
SLIT3-202ENST00000404867 TONSLQ96HA7 1378 aa12.2□□□□□ -0.46
SLIT3-202ENST00000404867 FAM50AQ14320 339 aaKnown RBP12.19□□□□□ -0.46
SLIT3-202ENST00000404867 USP35Q9P2H5 1018 aa12.19□□□□□ -0.46
SLIT3-202ENST00000404867 CSRNP3Q8WYN3 585 aa12.19□□□□□ -0.46
SLIT3-202ENST00000404867 RSF1Q96T23 1441 aaPredicted RBP12.18□□□□□ -0.46
SLIT3-202ENST00000404867 CCDC136Q96JN2 1154 aa12.18□□□□□ -0.46
SLIT3-202ENST00000404867 CHAF1AQ13111 956 aaPredicted RBP12.18□□□□□ -0.46
SLIT3-202ENST00000404867 CHMP4BQ9H444 224 aaKnown RBP12.18□□□□□ -0.46
SLIT3-202ENST00000404867 TRIM52Q96A61 297 aa12.18□□□□□ -0.46
SLIT3-202ENST00000404867 GOLGA3Q08378 1498 aa12.17□□□□□ -0.46
SLIT3-202ENST00000404867 BCANQ96GW7 911 aa12.16□□□□□ -0.46
SLIT3-202ENST00000404867 CEP164Q9UPV0 1460 aa12.14□□□□□ -0.47
SLIT3-202ENST00000404867 CASC1Q6TDU7 716 aa12.13□□□□□ -0.47
SLIT3-202ENST00000404867 ZRSR1Q15695 479 aaKnown RBP12.13□□□□□ -0.47
SLIT3-202ENST00000404867 FKBP8Q14318 412 aa12.11□□□□□ -0.47
SLIT3-202ENST00000404867 NPM2Q86SE8 214 aaKnown RBP12.09□□□□□ -0.47
SLIT3-202ENST00000404867 KIF27Q86VH2 1401 aa12.09□□□□□ -0.47
SLIT3-202ENST00000404867 FHAD1B1AJZ9 1412 aa12.08□□□□□ -0.48
SLIT3-202ENST00000404867 SLC24A1O60721 1099 aa12.08□□□□□ -0.48
SLIT3-202ENST00000404867 PPARGC1BQ86YN6 1023 aaKnown RBP12.07□□□□□ -0.48
SLIT3-202ENST00000404867 MS4A1P11836 297 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms