RNA–Protein interactions for RNA: ENST00000363192.1

RNU4-58P-201, Transcript of RNA, U4 small nuclear 58, pseudogene, humanhuman

BASIC

Gene RNU4-58P, Length 141 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-58P-201ENST00000363192 AEBP2Q6ZN18 517 aaPredicted RBP7.6□□□□□ -1.19
RNU4-58P-201ENST00000363192 CHIC1Q5VXU3 224 aa7.13□□□□□ -1.27
RNU4-58P-201ENST00000363192 SENP3Q9H4L4 574 aaPredicted RBP6.43□□□□□ -1.38
RNU4-58P-201ENST00000363192 PHF23Q9BUL5 403 aaPredicted RBP6.35□□□□□ -1.39
RNU4-58P-201ENST00000363192 FOXD1Q16676 465 aa6.03□□□□□ -1.44
RNU4-58P-201ENST00000363192 MSH5O43196 834 aa5.63□□□□□ -1.51
RNU4-58P-201ENST00000363192 PLPPR3Q6T4P5 718 aa5.63□□□□□ -1.51
RNU4-58P-201ENST00000363192 POTEDQ86YR6 584 aa5.63□□□□□ -1.51
RNU4-58P-201ENST00000363192 PPP6R1Q9UPN7 881 aa5.61□□□□□ -1.51
RNU4-58P-201ENST00000363192 PIAS4Q8N2W9 510 aaPredicted RBP5.58□□□□□ -1.52
RNU4-58P-201ENST00000363192 ADRA2BP18089 450 aa5.56□□□□□ -1.52
RNU4-58P-201ENST00000363192 MAPK8IP2Q13387 824 aaPredicted RBP5.14□□□□□ -1.59
RNU4-58P-201ENST00000363192 DMRT2Q9Y5R5 561 aa5.12□□□□□ -1.59
RNU4-58P-201ENST00000363192 SCAF1Q9H7N4 1312 aaKnown RBP5.03□□□□□ -1.6
RNU4-58P-201ENST00000363192 PPP4R3CPQ6ZMV5 832 aa4.94□□□□□ -1.62
RNU4-58P-201ENST00000363192 HOXD11P31277 338 aaPredicted RBP4.91□□□□□ -1.62
RNU4-58P-201ENST00000363192 CNKSR2Q8WXI2 1034 aa4.85□□□□□ -1.63
RNU4-58P-201ENST00000363192 CACNB1Q02641 598 aaPredicted RBP4.84□□□□□ -1.63
RNU4-58P-201ENST00000363192 RNF216Q9NWF9 866 aaPredicted RBP4.84□□□□□ -1.63
RNU4-58P-201ENST00000363192 DCAF8L1A6NGE4 600 aa4.83□□□□□ -1.64
RNU4-58P-201ENST00000363192 RNF39Q9H2S5 420 aa4.83□□□□□ -1.64
RNU4-58P-201ENST00000363192 DNAJC5BQ9UF47 199 aa4.75□□□□□ -1.65
RNU4-58P-201ENST00000363192 C1QBPQ07021 282 aaKnown RBP4.73□□□□□ -1.65
RNU4-58P-201ENST00000363192 NPM3O75607 178 aaKnown RBP4.69□□□□□ -1.66
RNU4-58P-201ENST00000363192 NCBP3Q53F19 620 aaKnown RBP4.69□□□□□ -1.66
RNU4-58P-201ENST00000363192 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.61□□□□□ -1.67
RNU4-58P-201ENST00000363192 U3KPZ7 1027 aaPredicted RBP4.57□□□□□ -1.68
RNU4-58P-201ENST00000363192 KCNA4P22459 653 aa4.54□□□□□ -1.68
RNU4-58P-201ENST00000363192 SPINK5Q9NQ38 1064 aaPredicted RBP4.52□□□□□ -1.69
RNU4-58P-201ENST00000363192 SLC4A2P04920 1241 aa4.51□□□□□ -1.69
RNU4-58P-201ENST00000363192 DSG3P32926 999 aa4.5□□□□□ -1.69
RNU4-58P-201ENST00000363192 CAPN15O75808 1086 aa4.46□□□□□ -1.7
RNU4-58P-201ENST00000363192 POTEHQ6S545 545 aa4.38□□□□□ -1.71
RNU4-58P-201ENST00000363192 ABCB7O75027 752 aa4.37□□□□□ -1.71
RNU4-58P-201ENST00000363192 TRHP20396 242 aaPredicted RBP4.37□□□□□ -1.71
RNU4-58P-201ENST00000363192 ZNF219Q9P2Y4 722 aaPredicted RBP4.37□□□□□ -1.71
RNU4-58P-201ENST00000363192 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.35□□□□□ -1.71
RNU4-58P-201ENST00000363192 APLP2Q06481 763 aa4.35□□□□□ -1.71
RNU4-58P-201ENST00000363192 HNRNPUL2Q1KMD3 747 aaKnown RBP4.35□□□□□ -1.71
RNU4-58P-201ENST00000363192 SAMD1Q6SPF0 538 aaPredicted RBP4.35□□□□□ -1.71
RNU4-58P-201ENST00000363192 MYCNP04198 464 aaPredicted RBP4.3□□□□□ -1.72
RNU4-58P-201ENST00000363192 POLA2Q14181 598 aa4.26□□□□□ -1.73
RNU4-58P-201ENST00000363192 ATF5Q9Y2D1 282 aaPredicted RBP4.26□□□□□ -1.73
RNU4-58P-201ENST00000363192 RBM42Q9BTD8 480 aaKnown RBP4.24□□□□□ -1.73
RNU4-58P-201ENST00000363192 SLC4A1APQ9BWU0 796 aaKnown RBP4.24□□□□□ -1.73
RNU4-58P-201ENST00000363192 FOXD4L1Q9NU39 408 aa4.23□□□□□ -1.73
RNU4-58P-201ENST00000363192 ZBTB22O15209 634 aa4.21□□□□□ -1.74
RNU4-58P-201ENST00000363192 CHRDL2Q6WN34 429 aa4.2□□□□□ -1.74
RNU4-58P-201ENST00000363192 AKT1S1Q96B36 256 aa4.16□□□□□ -1.74
RNU4-58P-201ENST00000363192 OSCARQ8IYS5 282 aa4.15□□□□□ -1.75
RNU4-58P-201ENST00000363192 ZBTB12Q9Y330 459 aaPredicted RBP4.15□□□□□ -1.75
RNU4-58P-201ENST00000363192 REM2Q8IYK8 340 aaPredicted RBP4.13□□□□□ -1.75
RNU4-58P-201ENST00000363192 ATXN8OSP0DMR3 200 aa4.11□□□□□ -1.75
RNU4-58P-201ENST00000363192 PIP4P2Q8N4L2 257 aa4.1□□□□□ -1.75
RNU4-58P-201ENST00000363192 PITPNM1O00562 1244 aa4.09□□□□□ -1.75
RNU4-58P-201ENST00000363192 FXR2P51116 673 aaKnown RBP eCLIP4.08□□□□□ -1.76
RNU4-58P-201ENST00000363192 SP7Q8TDD2 431 aaPredicted RBP4.08□□□□□ -1.76
RNU4-58P-201ENST00000363192 MKRN4PQ13434 485 aaPredicted RBP4.07□□□□□ -1.76
RNU4-58P-201ENST00000363192 SPDYE2BA6NHP3 402 aa4.03□□□□□ -1.76
RNU4-58P-201ENST00000363192 SPDYE6P0CI01 402 aa4.03□□□□□ -1.76
RNU4-58P-201ENST00000363192 SPDYE2Q495Y8 402 aa4.03□□□□□ -1.76
RNU4-58P-201ENST00000363192 EVX2Q03828 476 aa4.02□□□□□ -1.77
RNU4-58P-201ENST00000363192 SSUH2Q9Y2M2 353 aa4.02□□□□□ -1.77
RNU4-58P-201ENST00000363192 FBLN2P98095 1184 aa4.01□□□□□ -1.77
RNU4-58P-201ENST00000363192 HAX1O00165 279 aa4□□□□□ -1.77
RNU4-58P-201ENST00000363192 SPDYE1Q8NFV5 336 aaPredicted RBP3.97□□□□□ -1.77
RNU4-58P-201ENST00000363192 PRKAR2AP13861 404 aaKnown RBP3.96□□□□□ -1.78
RNU4-58P-201ENST00000363192 ZNF692Q9BU19 519 aaPredicted RBP3.96□□□□□ -1.78
RNU4-58P-201ENST00000363192 C19orf67A6NJJ6 358 aa3.95□□□□□ -1.78
RNU4-58P-201ENST00000363192 CSRNP3Q8WYN3 585 aa3.94□□□□□ -1.78
RNU4-58P-201ENST00000363192 CLEC11AQ9Y240 323 aa3.94□□□□□ -1.78
RNU4-58P-201ENST00000363192 CHADLQ6NUI6 762 aa3.92□□□□□ -1.78
RNU4-58P-201ENST00000363192 PABPN1Q86U42 306 aaKnown RBP eCLIP3.91□□□□□ -1.78
RNU4-58P-201ENST00000363192 GABBR2O75899 941 aa3.9□□□□□ -1.79
RNU4-58P-201ENST00000363192 PRR29P0C7W0 189 aa3.88□□□□□ -1.79
RNU4-58P-201ENST00000363192 FARP1Q9Y4F1 1045 aaPredicted RBP3.86□□□□□ -1.79
RNU4-58P-201ENST00000363192 POTEIP0CG38 1075 aa3.85□□□□□ -1.79
RNU4-58P-201ENST00000363192 CD44P16070 742 aaKnown RBP3.83□□□□□ -1.8
RNU4-58P-201ENST00000363192 CREBZFQ9NS37 354 aa3.83□□□□□ -1.8
RNU4-58P-201ENST00000363192 LHX8Q68G74 356 aa3.82□□□□□ -1.8
RNU4-58P-201ENST00000363192 ZNF579Q8NAF0 562 aaKnown RBP3.8□□□□□ -1.8
RNU4-58P-201ENST00000363192 EHMT2Q96KQ7 1210 aa3.8□□□□□ -1.8
RNU4-58P-201ENST00000363192 MNX1P50219 401 aaPredicted RBP3.79□□□□□ -1.8
RNU4-58P-201ENST00000363192 SPDYE4A6NLX3 237 aa3.78□□□□□ -1.8
RNU4-58P-201ENST00000363192 CLCN6P51797 869 aa3.78□□□□□ -1.8
RNU4-58P-201ENST00000363192 STAG3Q9UJ98 1225 aa3.77□□□□□ -1.81
RNU4-58P-201ENST00000363192 GALR2O43603 387 aaPredicted RBP3.76□□□□□ -1.81
RNU4-58P-201ENST00000363192 ZRANB1Q9UGI0 708 aa3.76□□□□□ -1.81
RNU4-58P-201ENST00000363192 PROM2Q8N271 834 aa3.75□□□□□ -1.81
RNU4-58P-201ENST00000363192 PHF12Q96QT6 1004 aa3.73□□□□□ -1.81
RNU4-58P-201ENST00000363192 POTEB2H3BUK9 544 aa3.72□□□□□ -1.81
RNU4-58P-201ENST00000363192 DCBLD2Q96PD2 775 aa3.72□□□□□ -1.81
RNU4-58P-201ENST00000363192 PELP1Q8IZL8 1130 aaKnown RBP3.71□□□□□ -1.82
RNU4-58P-201ENST00000363192 OTUD5Q96G74 571 aa3.7□□□□□ -1.82
RNU4-58P-201ENST00000363192 PAK3O75914 559 aaPredicted RBP3.68□□□□□ -1.82
RNU4-58P-201ENST00000363192 NPM1P06748 294 aaKnown RBP eCLIP3.68□□□□□ -1.82
RNU4-58P-201ENST00000363192 ASTLQ6HA08 431 aaPredicted RBP3.68□□□□□ -1.82
RNU4-58P-201ENST00000363192 MS4A3Q96HJ5 214 aa3.68□□□□□ -1.82
RNU4-58P-201ENST00000363192 POTEJP0CG39 1038 aa3.67□□□□□ -1.82
RNU4-58P-201ENST00000363192 CCDC61Q9Y6R9 512 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms