Protein–RNA interactions for Protein: Q5VXU3

CHIC1, Cysteine-rich hydrophobic domain-containing protein 1, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHIC1Q5VXU3 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
CHIC1Q5VXU3 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
CHIC1Q5VXU3 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CHIC1Q5VXU3 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
CHIC1Q5VXU3 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CHIC1Q5VXU3 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CHIC1Q5VXU3 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CHIC1Q5VXU3 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC10.2□□□□□ -0.78
CHIC1Q5VXU3 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC10.2□□□□□ -0.78
CHIC1Q5VXU3 RNU6-1094P-201ENST00000362416 104 ntBASIC10.2□□□□□ -0.78
CHIC1Q5VXU3 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
CHIC1Q5VXU3 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CHIC1Q5VXU3 NME1P1-201ENST00000420914 382 ntBASIC10.2□□□□□ -0.78
CHIC1Q5VXU3 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC10.2□□□□□ -0.78
CHIC1Q5VXU3 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC10.2□□□□□ -0.78
CHIC1Q5VXU3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC10.2□□□□□ -0.78
CHIC1Q5VXU3 AL110115.1-201ENST00000614396 364 ntBASIC10.2□□□□□ -0.78
CHIC1Q5VXU3 MIR6729-201ENST00000618194 65 ntBASIC10.2□□□□□ -0.78
CHIC1Q5VXU3 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
CHIC1Q5VXU3 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CHIC1Q5VXU3 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CHIC1Q5VXU3 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CHIC1Q5VXU3 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC10.2□□□□□ -0.78
CHIC1Q5VXU3 AL662795.2-201ENST00000624252 3706 ntBASIC10.19□□□□□ -0.78
CHIC1Q5VXU3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC10.19□□□□□ -0.78
CHIC1Q5VXU3 AC133552.1-201ENST00000569988 4007 ntBASIC10.19□□□□□ -0.78
CHIC1Q5VXU3 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CHIC1Q5VXU3 SNORA40.18-201ENST00000391200 128 ntBASIC10.19□□□□□ -0.78
CHIC1Q5VXU3 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC10.19□□□□□ -0.78
CHIC1Q5VXU3 RNU7-14P-201ENST00000459331 62 ntBASIC10.19□□□□□ -0.78
CHIC1Q5VXU3 RPL23AP63-201ENST00000498752 471 ntBASIC10.19□□□□□ -0.78
CHIC1Q5VXU3 MIR4439-201ENST00000583746 80 ntBASIC10.19□□□□□ -0.78
CHIC1Q5VXU3 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC10.19□□□□□ -0.78
CHIC1Q5VXU3 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC10.19□□□□□ -0.78
CHIC1Q5VXU3 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CHIC1Q5VXU3 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CHIC1Q5VXU3 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CHIC1Q5VXU3 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CHIC1Q5VXU3 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CHIC1Q5VXU3 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CHIC1Q5VXU3 RNU1-30P-201ENST00000606575 163 ntBASIC10.18□□□□□ -0.78
CHIC1Q5VXU3 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CHIC1Q5VXU3 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
CHIC1Q5VXU3 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC10.18□□□□□ -0.78
CHIC1Q5VXU3 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CHIC1Q5VXU3 AC006504.1-201ENST00000562493 3666 ntBASIC10.17□□□□□ -0.78
CHIC1Q5VXU3 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CHIC1Q5VXU3 BX276092.6-201ENST00000430476 250 ntBASIC10.17□□□□□ -0.78
CHIC1Q5VXU3 BX276092.8-201ENST00000455722 250 ntBASIC10.17□□□□□ -0.78
CHIC1Q5VXU3 AC140658.3-201ENST00000567603 271 ntBASIC10.17□□□□□ -0.78
CHIC1Q5VXU3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC10.17□□□□□ -0.78
CHIC1Q5VXU3 AL359075.3-201ENST00000613288 217 ntBASIC10.17□□□□□ -0.78
CHIC1Q5VXU3 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC10.17□□□□□ -0.78
CHIC1Q5VXU3 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CHIC1Q5VXU3 DMD-211ENST00000378707 7410 ntTSL 5 BASIC10.17□□□□□ -0.78
CHIC1Q5VXU3 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CHIC1Q5VXU3 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
CHIC1Q5VXU3 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
CHIC1Q5VXU3 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CHIC1Q5VXU3 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC10.16□□□□□ -0.78
CHIC1Q5VXU3 AL035398.1-201ENST00000430869 322 ntBASIC10.16□□□□□ -0.78
CHIC1Q5VXU3 AC016717.1-201ENST00000448918 286 ntBASIC10.16□□□□□ -0.78
CHIC1Q5VXU3 RN7SL352P-201ENST00000466002 277 ntBASIC10.16□□□□□ -0.78
CHIC1Q5VXU3 RN7SKP238-201ENST00000516483 249 ntBASIC10.16□□□□□ -0.78
CHIC1Q5VXU3 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CHIC1Q5VXU3 AC020656.2-201ENST00000613291 5309 ntBASIC10.16□□□□□ -0.78
CHIC1Q5VXU3 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CHIC1Q5VXU3 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
CHIC1Q5VXU3 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CHIC1Q5VXU3 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CHIC1Q5VXU3 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
CHIC1Q5VXU3 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CHIC1Q5VXU3 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CHIC1Q5VXU3 RNA5SP211-201ENST00000365516 117 ntBASIC10.15□□□□□ -0.78
CHIC1Q5VXU3 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CHIC1Q5VXU3 RNU6-296P-201ENST00000384608 107 ntBASIC10.15□□□□□ -0.78
CHIC1Q5VXU3 MIR3134-201ENST00000579433 74 ntBASIC10.15□□□□□ -0.78
CHIC1Q5VXU3 RN7SL753P-201ENST00000581238 290 ntBASIC10.15□□□□□ -0.78
CHIC1Q5VXU3 MIR6862-1-201ENST00000613016 70 ntBASIC10.15□□□□□ -0.78
CHIC1Q5VXU3 MIR6862-2-201ENST00000614755 70 ntBASIC10.15□□□□□ -0.78
CHIC1Q5VXU3 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC10.15□□□□□ -0.78
CHIC1Q5VXU3 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CHIC1Q5VXU3 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CHIC1Q5VXU3 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC10.15□□□□□ -0.78
CHIC1Q5VXU3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
CHIC1Q5VXU3 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
CHIC1Q5VXU3 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
CHIC1Q5VXU3 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
CHIC1Q5VXU3 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CHIC1Q5VXU3 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CHIC1Q5VXU3 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
CHIC1Q5VXU3 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC10.14□□□□□ -0.79
CHIC1Q5VXU3 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC10.14□□□□□ -0.79
CHIC1Q5VXU3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC10.14□□□□□ -0.79
CHIC1Q5VXU3 RNA5SP273-201ENST00000362484 113 ntBASIC10.14□□□□□ -0.79
CHIC1Q5VXU3 RN7SKP15-201ENST00000364742 309 ntBASIC10.14□□□□□ -0.79
CHIC1Q5VXU3 RNU1-59P-201ENST00000364829 162 ntBASIC10.14□□□□□ -0.79
CHIC1Q5VXU3 RNU4-64P-201ENST00000410795 131 ntBASIC10.14□□□□□ -0.79
CHIC1Q5VXU3 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
CHIC1Q5VXU3 ACA64.4-201ENST00000459070 127 ntBASIC10.14□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms