RNA–Protein interactions for RNA: ENST00000562493.1

AC006504.1-201, humanhuman

BASIC

Gene AC006504.1, Length 3,666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006504.1-201ENST00000562493 CHIC1Q5VXU3 224 aa10.17□□□□□ -0.78
AC006504.1-201ENST00000562493 AEBP2Q6ZN18 517 aaPredicted RBP10.12□□□□□ -0.79
AC006504.1-201ENST00000562493 PHF23Q9BUL5 403 aaPredicted RBP9.01□□□□□ -0.97
AC006504.1-201ENST00000562493 SENP3Q9H4L4 574 aaPredicted RBP8.46□□□□□ -1.06
AC006504.1-201ENST00000562493 PLPPR3Q6T4P5 718 aa8.31□□□□□ -1.08
AC006504.1-201ENST00000562493 FOXD1Q16676 465 aa7.84□□□□□ -1.15
AC006504.1-201ENST00000562493 PPP6R1Q9UPN7 881 aa7.77□□□□□ -1.17
AC006504.1-201ENST00000562493 ADRA2BP18089 450 aa7.74□□□□□ -1.17
AC006504.1-201ENST00000562493 NISCHQ9Y2I1 1504 aa7.6□□□□□ -1.19
AC006504.1-201ENST00000562493 KCNA4P22459 653 aa7.48□□□□□ -1.21
AC006504.1-201ENST00000562493 PPP4R3CPQ6ZMV5 832 aa7.33□□□□□ -1.24
AC006504.1-201ENST00000562493 DNAJC5BQ9UF47 199 aa7.33□□□□□ -1.24
AC006504.1-201ENST00000562493 PIAS4Q8N2W9 510 aaPredicted RBP7.31□□□□□ -1.24
AC006504.1-201ENST00000562493 NCBP3Q53F19 620 aaKnown RBP7.17□□□□□ -1.26
AC006504.1-201ENST00000562493 NPM3O75607 178 aaKnown RBP7.17□□□□□ -1.26
AC006504.1-201ENST00000562493 CSRNP3Q8WYN3 585 aa7.16□□□□□ -1.26
AC006504.1-201ENST00000562493 CNKSR2Q8WXI2 1034 aa7.12□□□□□ -1.27
AC006504.1-201ENST00000562493 SLC4A1APQ9BWU0 796 aaKnown RBP7.11□□□□□ -1.27
AC006504.1-201ENST00000562493 MSH5O43196 834 aa7.09□□□□□ -1.27
AC006504.1-201ENST00000562493 EHMT2Q96KQ7 1210 aa7.06□□□□□ -1.28
AC006504.1-201ENST00000562493 SCAF1Q9H7N4 1312 aaKnown RBP7.01□□□□□ -1.29
AC006504.1-201ENST00000562493 ZBTB22O15209 634 aa7□□□□□ -1.29
AC006504.1-201ENST00000562493 RNF216Q9NWF9 866 aaPredicted RBP6.96□□□□□ -1.29
AC006504.1-201ENST00000562493 HOXD11P31277 338 aaPredicted RBP6.92□□□□□ -1.3
AC006504.1-201ENST00000562493 DMRT2Q9Y5R5 561 aa6.89□□□□□ -1.31
AC006504.1-201ENST00000562493 MAPK8IP2Q13387 824 aaPredicted RBP6.88□□□□□ -1.31
AC006504.1-201ENST00000562493 FOXD4L1Q9NU39 408 aa6.82□□□□□ -1.32
AC006504.1-201ENST00000562493 SLC4A2P04920 1241 aa6.76□□□□□ -1.33
AC006504.1-201ENST00000562493 ATXN8OSP0DMR3 200 aa6.71□□□□□ -1.34
AC006504.1-201ENST00000562493 CCDC180Q9P1Z9 1646 aa6.63□□□□□ -1.35
AC006504.1-201ENST00000562493 MYCNP04198 464 aaPredicted RBP6.59□□□□□ -1.35
AC006504.1-201ENST00000562493 SLC24A1O60721 1099 aa6.58□□□□□ -1.36
AC006504.1-201ENST00000562493 SHROOM4Q9ULL8 1493 aa6.56□□□□□ -1.36
AC006504.1-201ENST00000562493 SUPT5HO00267 1087 aaKnown RBP6.55□□□□□ -1.36
AC006504.1-201ENST00000562493 DCAF8L2P0C7V8 631 aa6.51□□□□□ -1.37
AC006504.1-201ENST00000562493 ATF5Q9Y2D1 282 aaPredicted RBP6.43□□□□□ -1.38
AC006504.1-201ENST00000562493 ABCC9O60706 1549 aa6.42□□□□□ -1.38
AC006504.1-201ENST00000562493 U3KPZ7 1027 aaPredicted RBP6.41□□□□□ -1.38
AC006504.1-201ENST00000562493 RTN4Q9NQC3 1192 aaKnown RBP6.38□□□□□ -1.39
AC006504.1-201ENST00000562493 ZCCHC6Q5VYS8 1495 aaKnown RBP6.37□□□□□ -1.39
AC006504.1-201ENST00000562493 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.36□□□□□ -1.39
AC006504.1-201ENST00000562493 HNRNPUL2Q1KMD3 747 aaKnown RBP6.36□□□□□ -1.39
AC006504.1-201ENST00000562493 SAMD1Q6SPF0 538 aaPredicted RBP6.35□□□□□ -1.39
AC006504.1-201ENST00000562493 PROM2Q8N271 834 aa6.34□□□□□ -1.39
AC006504.1-201ENST00000562493 AMER1Q5JTC6 1135 aaPredicted RBP6.33□□□□□ -1.4
AC006504.1-201ENST00000562493 UNC13AQ9UPW8 1703 aa6.32□□□□□ -1.4
AC006504.1-201ENST00000562493 PCGF6Q9BYE7 350 aa6.31□□□□□ -1.4
AC006504.1-201ENST00000562493 FKBP8Q14318 412 aa6.26□□□□□ -1.41
AC006504.1-201ENST00000562493 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.25□□□□□ -1.41
AC006504.1-201ENST00000562493 ZNF219Q9P2Y4 722 aaPredicted RBP6.24□□□□□ -1.41
AC006504.1-201ENST00000562493 PPARGC1BQ86YN6 1023 aaKnown RBP6.22□□□□□ -1.41
AC006504.1-201ENST00000562493 MKRN4PQ13434 485 aaPredicted RBP6.2□□□□□ -1.42
AC006504.1-201ENST00000562493 SCRIBQ14160 1630 aa6.2□□□□□ -1.42
AC006504.1-201ENST00000562493 DCAF1Q9Y4B6 1507 aa6.2□□□□□ -1.42
AC006504.1-201ENST00000562493 APLP2Q06481 763 aa6.19□□□□□ -1.42
AC006504.1-201ENST00000562493 MYO15BQ96JP2 1530 aa6.18□□□□□ -1.42
AC006504.1-201ENST00000562493 RNF39Q9H2S5 420 aa6.18□□□□□ -1.42
AC006504.1-201ENST00000562493 BICRAQ9NZM4 1560 aa6.17□□□□□ -1.42
AC006504.1-201ENST00000562493 RB1CC1Q8TDY2 1594 aa6.17□□□□□ -1.42
AC006504.1-201ENST00000562493 LOC105371045A0A1W2PR82 267 aa6.16□□□□□ -1.42
AC006504.1-201ENST00000562493 HRCP23327 699 aa6.15□□□□□ -1.42
AC006504.1-201ENST00000562493 NACADO15069 1562 aa6.15□□□□□ -1.42
AC006504.1-201ENST00000562493 FAM9AQ8IZU1 332 aaPredicted RBP6.14□□□□□ -1.43
AC006504.1-201ENST00000562493 DCAF8L1A6NGE4 600 aa6.1□□□□□ -1.43
AC006504.1-201ENST00000562493 C1QBPQ07021 282 aaKnown RBP6.07□□□□□ -1.44
AC006504.1-201ENST00000562493 PABPN1Q86U42 306 aaKnown RBP eCLIP6.07□□□□□ -1.44
AC006504.1-201ENST00000562493 TTBK1Q5TCY1 1321 aaPredicted RBP6.06□□□□□ -1.44
AC006504.1-201ENST00000562493 SPDYE4A6NLX3 237 aa6.05□□□□□ -1.44
AC006504.1-201ENST00000562493 SPINK5Q9NQ38 1064 aaPredicted RBP6.04□□□□□ -1.44
AC006504.1-201ENST00000562493 FBXO3Q9UK99 471 aa6.04□□□□□ -1.44
AC006504.1-201ENST00000562493 DNAJC5Q9H3Z4 198 aa6.02□□□□□ -1.45
AC006504.1-201ENST00000562493 CECR2Q9BXF3 1484 aa5.99□□□□□ -1.45
AC006504.1-201ENST00000562493 POTEDQ86YR6 584 aa5.99□□□□□ -1.45
AC006504.1-201ENST00000562493 ZBTB12Q9Y330 459 aaPredicted RBP5.98□□□□□ -1.45
AC006504.1-201ENST00000562493 FBLN2P98095 1184 aa5.97□□□□□ -1.45
AC006504.1-201ENST00000562493 POLA2Q14181 598 aa5.97□□□□□ -1.45
AC006504.1-201ENST00000562493 IFNLR1Q8IU57 520 aaPredicted RBP5.97□□□□□ -1.45
AC006504.1-201ENST00000562493 TRIM41Q8WV44 630 aa5.97□□□□□ -1.45
AC006504.1-201ENST00000562493 VASPP50552 380 aaPredicted RBP5.96□□□□□ -1.45
AC006504.1-201ENST00000562493 TRIM26Q12899 539 aaPredicted RBP5.96□□□□□ -1.46
AC006504.1-201ENST00000562493 SSUH2Q9Y2M2 353 aa5.96□□□□□ -1.46
AC006504.1-201ENST00000562493 DSG3P32926 999 aa5.94□□□□□ -1.46
AC006504.1-201ENST00000562493 CC2D2AQ9P2K1 1620 aa5.94□□□□□ -1.46
AC006504.1-201ENST00000562493 MROH2BQ7Z745 1585 aa5.93□□□□□ -1.46
AC006504.1-201ENST00000562493 PKD2Q13563 968 aa5.92□□□□□ -1.46
AC006504.1-201ENST00000562493 WIZO95785 1651 aa5.91□□□□□ -1.46
AC006504.1-201ENST00000562493 RSF1Q96T23 1441 aaPredicted RBP5.9□□□□□ -1.46
AC006504.1-201ENST00000562493 CCER1Q8TC90 406 aaPredicted RBP5.89□□□□□ -1.47
AC006504.1-201ENST00000562493 SMARCA4P51532 1647 aa5.88□□□□□ -1.47
AC006504.1-201ENST00000562493 EIF4G1Q04637 1599 aaKnown RBP5.88□□□□□ -1.47
AC006504.1-201ENST00000562493 TRHP20396 242 aaPredicted RBP5.87□□□□□ -1.47
AC006504.1-201ENST00000562493 CUX2O14529 1486 aa5.87□□□□□ -1.47
AC006504.1-201ENST00000562493 PLCB2Q00722 1185 aa5.86□□□□□ -1.47
AC006504.1-201ENST00000562493 SPDYE2BA6NHP3 402 aa5.86□□□□□ -1.47
AC006504.1-201ENST00000562493 SPDYE6P0CI01 402 aa5.86□□□□□ -1.47
AC006504.1-201ENST00000562493 RANGAP1P46060 587 aaPredicted RBP5.86□□□□□ -1.47
AC006504.1-201ENST00000562493 SPDYE2Q495Y8 402 aa5.86□□□□□ -1.47
AC006504.1-201ENST00000562493 YTHDC1Q96MU7 727 aaKnown RBP5.86□□□□□ -1.47
AC006504.1-201ENST00000562493 CAPN15O75808 1086 aa5.85□□□□□ -1.47
AC006504.1-201ENST00000562493 STAG3Q9UJ98 1225 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms