RNA–Protein interactions for RNA: ENST00000395445.5

PCDH15-213, Transcript of protocadherin related 15, humanhuman

TSL 1 (best) BASIC

Gene PCDH15, Length 5,917 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-213ENST00000395445 DCAF8L2P0C7V8 631 aa11.56□□□□□ -0.56
PCDH15-213ENST00000395445 PELP1Q8IZL8 1130 aaKnown RBP11.25□□□□□ -0.61
PCDH15-213ENST00000395445 ERICH6Q7L0X2 663 aa10.92□□□□□ -0.66
PCDH15-213ENST00000395445 FAM9AQ8IZU1 332 aaPredicted RBP10.83□□□□□ -0.68
PCDH15-213ENST00000395445 EHMT2Q96KQ7 1210 aa10.82□□□□□ -0.68
PCDH15-213ENST00000395445 MYT1Q01538 1121 aa10.76□□□□□ -0.69
PCDH15-213ENST00000395445 CCER1Q8TC90 406 aaPredicted RBP10.75□□□□□ -0.69
PCDH15-213ENST00000395445 APLP2Q06481 763 aa10.74□□□□□ -0.69
PCDH15-213ENST00000395445 SUPT5HO00267 1087 aaKnown RBP10.65□□□□□ -0.7
PCDH15-213ENST00000395445 NISCHQ9Y2I1 1504 aa10.55□□□□□ -0.72
PCDH15-213ENST00000395445 TTBK1Q5TCY1 1321 aaPredicted RBP10.47□□□□□ -0.73
PCDH15-213ENST00000395445 HRCP23327 699 aa10.43□□□□□ -0.74
PCDH15-213ENST00000395445 ATP1B4Q9UN42 357 aaPredicted RBP10.41□□□□□ -0.74
PCDH15-213ENST00000395445 NEFLP07196 543 aa10.38□□□□□ -0.75
PCDH15-213ENST00000395445 DAXXQ9UER7 740 aaPredicted RBP10.37□□□□□ -0.75
PCDH15-213ENST00000395445 RANGAP1P46060 587 aaPredicted RBP10.35□□□□□ -0.75
PCDH15-213ENST00000395445 CENPBP07199 599 aaPredicted RBP10.34□□□□□ -0.75
PCDH15-213ENST00000395445 MYT1LQ9UL68 1186 aa10.28□□□□□ -0.76
PCDH15-213ENST00000395445 SHROOM4Q9ULL8 1493 aa10.28□□□□□ -0.76
PCDH15-213ENST00000395445 PPARGC1BQ86YN6 1023 aaKnown RBP10.26□□□□□ -0.77
PCDH15-213ENST00000395445 PCGF6Q9BYE7 350 aa10.25□□□□□ -0.77
PCDH15-213ENST00000395445 YTHDC1Q96MU7 727 aaKnown RBP10.23□□□□□ -0.77
PCDH15-213ENST00000395445 CHIC1Q5VXU3 224 aa10.14□□□□□ -0.79
PCDH15-213ENST00000395445 POLR3GLQ9BT43 218 aa10.14□□□□□ -0.79
PCDH15-213ENST00000395445 SLC4A1APQ9BWU0 796 aaKnown RBP10.12□□□□□ -0.79
PCDH15-213ENST00000395445 ZNF316A6NFI3 1004 aaPredicted RBP10.08□□□□□ -0.8
PCDH15-213ENST00000395445 SCAF1Q9H7N4 1312 aaKnown RBP10.06□□□□□ -0.8
PCDH15-213ENST00000395445 CLSPNQ9HAW4 1339 aa10.02□□□□□ -0.81
PCDH15-213ENST00000395445 ZEB1P37275 1124 aaPredicted RBP10□□□□□ -0.81
PCDH15-213ENST00000395445 CNGB1Q14028 1251 aaPredicted RBP9.99□□□□□ -0.81
PCDH15-213ENST00000395445 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.98□□□□□ -0.81
PCDH15-213ENST00000395445 HNRNPUL2Q1KMD3 747 aaKnown RBP9.98□□□□□ -0.81
PCDH15-213ENST00000395445 RTL5Q5HYW3 569 aaPredicted RBP9.95□□□□□ -0.82
PCDH15-213ENST00000395445 UBTFP17480 764 aaKnown RBP9.95□□□□□ -0.82
PCDH15-213ENST00000395445 SLC24A1O60721 1099 aa9.9□□□□□ -0.83
PCDH15-213ENST00000395445 ZBTB47Q9UFB7 747 aaPredicted RBP9.9□□□□□ -0.83
PCDH15-213ENST00000395445 GTF3C3Q9Y5Q9 886 aa9.86□□□□□ -0.83
PCDH15-213ENST00000395445 ACIN1Q9UKV3 1341 aaKnown RBP9.82□□□□□ -0.84
PCDH15-213ENST00000395445 TRIM41Q8WV44 630 aa9.81□□□□□ -0.84
PCDH15-213ENST00000395445 ITGAEP38570 1179 aa9.81□□□□□ -0.84
PCDH15-213ENST00000395445 BCL11AQ9H165 835 aa9.81□□□□□ -0.84
PCDH15-213ENST00000395445 BCANQ96GW7 911 aa9.72□□□□□ -0.85
PCDH15-213ENST00000395445 NEUROD1Q13562 356 aa9.71□□□□□ -0.86
PCDH15-213ENST00000395445 TRIM26Q12899 539 aaPredicted RBP9.69□□□□□ -0.86
PCDH15-213ENST00000395445 CANXP27824 592 aaKnown RBP9.68□□□□□ -0.86
PCDH15-213ENST00000395445 PRKCSHP14314 528 aaPredicted RBP9.65□□□□□ -0.87
PCDH15-213ENST00000395445 NEFMP07197 916 aa9.64□□□□□ -0.87
PCDH15-213ENST00000395445 CDK11BP21127 795 aaKnown RBP9.64□□□□□ -0.87
PCDH15-213ENST00000395445 CDK11AQ9UQ88 783 aaPredicted RBP9.64□□□□□ -0.87
PCDH15-213ENST00000395445 ANP32BQ92688 251 aaKnown RBP9.58□□□□□ -0.88
PCDH15-213ENST00000395445 TRIM52Q96A61 297 aa9.56□□□□□ -0.88
PCDH15-213ENST00000395445 DIEXFQ68CQ4 756 aaKnown RBP9.54□□□□□ -0.88
PCDH15-213ENST00000395445 ANP32EQ9BTT0 268 aa9.54□□□□□ -0.88
PCDH15-213ENST00000395445 ZNF326Q5BKZ1 582 aaKnown RBP9.52□□□□□ -0.89
PCDH15-213ENST00000395445 PLPPR3Q6T4P5 718 aa9.49□□□□□ -0.89
PCDH15-213ENST00000395445 HSP90AA1P07900 732 aaKnown RBP9.49□□□□□ -0.89
PCDH15-213ENST00000395445 FAM50AQ14320 339 aaKnown RBP9.47□□□□□ -0.89
PCDH15-213ENST00000395445 A0A0G2JS52 829 aa9.46□□□□□ -0.89
PCDH15-213ENST00000395445 EIF5BO60841 1220 aaKnown RBP9.46□□□□□ -0.9
PCDH15-213ENST00000395445 ESF1Q9H501 851 aaKnown RBP9.45□□□□□ -0.9
PCDH15-213ENST00000395445 LOC105371045A0A1W2PR82 267 aa9.44□□□□□ -0.9
PCDH15-213ENST00000395445 TULP1O00294 542 aaPredicted RBP9.44□□□□□ -0.9
PCDH15-213ENST00000395445 NPM2Q86SE8 214 aaKnown RBP9.42□□□□□ -0.9
PCDH15-213ENST00000395445 GLIPR1L2Q4G1C9 344 aa9.41□□□□□ -0.9
PCDH15-213ENST00000395445 ANP32AP39687 249 aaKnown RBP9.4□□□□□ -0.9
PCDH15-213ENST00000395445 CSRNP3Q8WYN3 585 aa9.4□□□□□ -0.91
PCDH15-213ENST00000395445 ANP32CO43423 234 aa9.38□□□□□ -0.91
PCDH15-213ENST00000395445 STAG3Q9UJ98 1225 aa9.38□□□□□ -0.91
PCDH15-213ENST00000395445 NCBP3Q53F19 620 aaKnown RBP9.37□□□□□ -0.91
PCDH15-213ENST00000395445 DCAF1Q9Y4B6 1507 aa9.36□□□□□ -0.91
PCDH15-213ENST00000395445 MYO15BQ96JP2 1530 aa9.35□□□□□ -0.91
PCDH15-213ENST00000395445 UPF2Q9HAU5 1272 aaKnown RBP9.34□□□□□ -0.91
PCDH15-213ENST00000395445 FBLN2P98095 1184 aa9.34□□□□□ -0.91
PCDH15-213ENST00000395445 ZBTB7CA1YPR0 619 aa9.3□□□□□ -0.92
PCDH15-213ENST00000395445 ARXQ96QS3 562 aa9.29□□□□□ -0.92
PCDH15-213ENST00000395445 ABCC9O60706 1549 aa9.29□□□□□ -0.92
PCDH15-213ENST00000395445 CHGAP10645 457 aaKnown RBP9.29□□□□□ -0.92
PCDH15-213ENST00000395445 CCDC180Q9P1Z9 1646 aa9.26□□□□□ -0.93
PCDH15-213ENST00000395445 PLEKHG5O94827 1062 aa9.24□□□□□ -0.93
PCDH15-213ENST00000395445 CLSTN1O94985 981 aa9.23□□□□□ -0.93
PCDH15-213ENST00000395445 NCLP19338 710 aaKnown RBP9.22□□□□□ -0.93
PCDH15-213ENST00000395445 ZRSR1Q15695 479 aaKnown RBP9.21□□□□□ -0.93
PCDH15-213ENST00000395445 MYH16Q9H6N6 1097 aa9.21□□□□□ -0.94
PCDH15-213ENST00000395445 PRM3Q9NNZ6 103 aa9.21□□□□□ -0.94
PCDH15-213ENST00000395445 HAP1P54257 671 aaPredicted RBP9.2□□□□□ -0.94
PCDH15-213ENST00000395445 TRIM44Q96DX7 344 aaPredicted RBP9.2□□□□□ -0.94
PCDH15-213ENST00000395445 NPHP1O15259 732 aa9.19□□□□□ -0.94
PCDH15-213ENST00000395445 C14orf37Q86TY3 774 aa9.19□□□□□ -0.94
PCDH15-213ENST00000395445 ZNF777Q9ULD5 760 aaPredicted RBP9.19□□□□□ -0.94
PCDH15-213ENST00000395445 TSHZ2Q9NRE2 1034 aa9.18□□□□□ -0.94
PCDH15-213ENST00000395445 ARID3CA6NKF2 412 aa9.18□□□□□ -0.94
PCDH15-213ENST00000395445 TNNT2P45379 298 aaPredicted RBP9.18□□□□□ -0.94
PCDH15-213ENST00000395445 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.15□□□□□ -0.94
PCDH15-213ENST00000395445 SUPT16HQ9Y5B9 1047 aaKnown RBP9.15□□□□□ -0.94
PCDH15-213ENST00000395445 ANO8Q9HCE9 1232 aaPredicted RBP9.14□□□□□ -0.95
PCDH15-213ENST00000395445 TPRNQ4KMQ1 711 aa9.14□□□□□ -0.95
PCDH15-213ENST00000395445 TAOK2Q9UL54 1235 aa9.14□□□□□ -0.95
PCDH15-213ENST00000395445 MIER1Q8N108 512 aa9.13□□□□□ -0.95
PCDH15-213ENST00000395445 PTMAP06454 111 aaKnown RBP9.12□□□□□ -0.95
PCDH15-213ENST00000395445 NPM1P06748 294 aaKnown RBP eCLIP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms