Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 AC005005.4-201ENST00000623789 16698 ntBASIC5.23□□□□□ -1.57
PCDHB3Q9Y5E6 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB3Q9Y5E6 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB3Q9Y5E6 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB3Q9Y5E6 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB3Q9Y5E6 ADAM5-202ENST00000399789 1942 ntBASIC5.23□□□□□ -1.57
PCDHB3Q9Y5E6 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB3Q9Y5E6 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 RNA5SP443-201ENST00000363083 132 ntBASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 RNA5SP223-201ENST00000365174 120 ntBASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 RNU6-969P-201ENST00000383900 105 ntBASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 RNU6-793P-201ENST00000384233 104 ntBASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 AL645733.1-201ENST00000402250 217 ntBASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 U3.40-201ENST00000408706 208 ntBASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 RN7SKP125-201ENST00000410481 302 ntBASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 EIF4A1P3-201ENST00000411521 244 ntBASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 COX5BP7-201ENST00000414780 274 ntBASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 AC096649.2-201ENST00000416186 393 ntBASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 RPL19P16-201ENST00000433839 588 ntBASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 RPL7AP6-201ENST00000477943 801 ntBASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 RN7SL97P-201ENST00000486780 299 ntBASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 AC016632.1-201ENST00000503994 196 ntBASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 RNU2-12P-201ENST00000517216 168 ntBASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 AC126915.2-201ENST00000610957 190 ntBASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 AC026951.1-201ENST00000559530 2459 ntBASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB3Q9Y5E6 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
PCDHB3Q9Y5E6 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.21□□□□□ -1.57
PCDHB3Q9Y5E6 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.57
PCDHB3Q9Y5E6 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
PCDHB3Q9Y5E6 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.57
PCDHB3Q9Y5E6 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 PCAT14-202ENST00000627127 3935 ntBASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 RNU6-1285P-201ENST00000363480 105 ntBASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 RNU6-1048P-201ENST00000364054 107 ntBASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 Y_RNA.393-201ENST00000383936 102 ntBASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 RNU6-32P-201ENST00000383948 107 ntBASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 RNU6-13P-201ENST00000384248 107 ntBASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 SNORA67-201ENST00000384423 137 ntBASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 RNU6-12P-201ENST00000384604 107 ntBASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 RNU6-41P-201ENST00000384741 107 ntBASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 MIR765-201ENST00000390226 114 ntBASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 RNA5SP339-201ENST00000390987 122 ntBASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 RNY4P30-201ENST00000410216 95 ntBASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 RNA5SP475-201ENST00000410568 110 ntBASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 AL356867.1-201ENST00000429623 299 ntBASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 Y_RNA.651-201ENST00000459380 103 ntBASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 AC091179.3-201ENST00000474761 144 ntBASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 AC008953.1-201ENST00000497334 318 ntBASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 SCARNA20.4-201ENST00000516969 131 ntBASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 MIR3121-201ENST00000579680 77 ntBASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 AL670379.3-201ENST00000605040 251 ntBASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 AL445567.2-201ENST00000618935 498 ntBASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 MAPK10-304ENST00000641341 3984 ntBASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 AC008555.8-201ENST00000623602 2168 ntBASIC5.21□□□□□ -1.58
PCDHB3Q9Y5E6 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHB3Q9Y5E6 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB3Q9Y5E6 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHB3Q9Y5E6 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB3Q9Y5E6 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
PCDHB3Q9Y5E6 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB3Q9Y5E6 AC004817.4-201ENST00000602396 3625 ntBASIC5.2□□□□□ -1.58
PCDHB3Q9Y5E6 RPL23P2-201ENST00000320371 421 ntBASIC5.2□□□□□ -1.58
PCDHB3Q9Y5E6 MIR133B-201ENST00000362210 119 ntBASIC5.2□□□□□ -1.58
PCDHB3Q9Y5E6 Z98749.2-208ENST00000381646 500 ntBASIC5.2□□□□□ -1.58
PCDHB3Q9Y5E6 Y_RNA.521-201ENST00000384560 114 ntBASIC5.2□□□□□ -1.58
PCDHB3Q9Y5E6 AL355497.1-201ENST00000406262 551 ntBASIC5.2□□□□□ -1.58
PCDHB3Q9Y5E6 RPL12P3-201ENST00000440080 396 ntBASIC5.2□□□□□ -1.58
PCDHB3Q9Y5E6 RPS27P1-201ENST00000450552 247 ntBASIC5.2□□□□□ -1.58
PCDHB3Q9Y5E6 RPL31P61-201ENST00000496160 376 ntBASIC5.2□□□□□ -1.58
PCDHB3Q9Y5E6 RNU6-513P-201ENST00000516104 104 ntBASIC5.2□□□□□ -1.58
PCDHB3Q9Y5E6 RNU6-561P-201ENST00000516222 102 ntBASIC5.2□□□□□ -1.58
PCDHB3Q9Y5E6 SCARNA16.4-201ENST00000516956 187 ntBASIC5.2□□□□□ -1.58
PCDHB3Q9Y5E6 RPL23AP53-201ENST00000521854 457 ntBASIC5.2□□□□□ -1.58
PCDHB3Q9Y5E6 HMGB1P40-201ENST00000525121 540 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms