RNA–Protein interactions for RNA: ENST00000364054.1

RNU6-1048P-201, Transcript of RNA, U6 small nuclear 1048, pseudogene, humanhuman

BASIC

Gene RNU6-1048P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1048P-201ENST00000364054 AEBP2Q6ZN18 517 aaPredicted RBP13.38□□□□□ -0.27
RNU6-1048P-201ENST00000364054 CHIC1Q5VXU3 224 aa12.71□□□□□ -0.37
RNU6-1048P-201ENST00000364054 SENP3Q9H4L4 574 aaPredicted RBP11.53□□□□□ -0.56
RNU6-1048P-201ENST00000364054 PHF23Q9BUL5 403 aaPredicted RBP11.33□□□□□ -0.6
RNU6-1048P-201ENST00000364054 FOXD1Q16676 465 aa10.69□□□□□ -0.7
RNU6-1048P-201ENST00000364054 PLPPR3Q6T4P5 718 aa10.2□□□□□ -0.78
RNU6-1048P-201ENST00000364054 MSH5O43196 834 aa10.09□□□□□ -0.79
RNU6-1048P-201ENST00000364054 PIAS4Q8N2W9 510 aaPredicted RBP10.07□□□□□ -0.8
RNU6-1048P-201ENST00000364054 ADRA2BP18089 450 aa9.96□□□□□ -0.82
RNU6-1048P-201ENST00000364054 PPP6R1Q9UPN7 881 aa9.93□□□□□ -0.82
RNU6-1048P-201ENST00000364054 POTEDQ86YR6 584 aa9.85□□□□□ -0.83
RNU6-1048P-201ENST00000364054 SCAF1Q9H7N4 1312 aaKnown RBP9.2□□□□□ -0.94
RNU6-1048P-201ENST00000364054 MAPK8IP2Q13387 824 aaPredicted RBP9.14□□□□□ -0.95
RNU6-1048P-201ENST00000364054 DMRT2Q9Y5R5 561 aa9.09□□□□□ -0.95
RNU6-1048P-201ENST00000364054 PPP4R3CPQ6ZMV5 832 aa8.92□□□□□ -0.98
RNU6-1048P-201ENST00000364054 DCAF8L1A6NGE4 600 aa8.89□□□□□ -0.99
RNU6-1048P-201ENST00000364054 CNKSR2Q8WXI2 1034 aa8.77□□□□□ -1.01
RNU6-1048P-201ENST00000364054 CACNB1Q02641 598 aaPredicted RBP8.72□□□□□ -1.01
RNU6-1048P-201ENST00000364054 HOXD11P31277 338 aaPredicted RBP8.71□□□□□ -1.02
RNU6-1048P-201ENST00000364054 NCBP3Q53F19 620 aaKnown RBP8.7□□□□□ -1.02
RNU6-1048P-201ENST00000364054 RNF216Q9NWF9 866 aaPredicted RBP8.68□□□□□ -1.02
RNU6-1048P-201ENST00000364054 RNF39Q9H2S5 420 aa8.54□□□□□ -1.04
RNU6-1048P-201ENST00000364054 DNAJC5BQ9UF47 199 aa8.48□□□□□ -1.05
RNU6-1048P-201ENST00000364054 C1QBPQ07021 282 aaKnown RBP8.45□□□□□ -1.06
RNU6-1048P-201ENST00000364054 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.44□□□□□ -1.06
RNU6-1048P-201ENST00000364054 NPM3O75607 178 aaKnown RBP8.42□□□□□ -1.06
RNU6-1048P-201ENST00000364054 KCNA4P22459 653 aa8.23□□□□□ -1.09
RNU6-1048P-201ENST00000364054 U3KPZ7 1027 aaPredicted RBP8.16□□□□□ -1.1
RNU6-1048P-201ENST00000364054 CAPN15O75808 1086 aa8.15□□□□□ -1.1
RNU6-1048P-201ENST00000364054 APLP2Q06481 763 aa8.1□□□□□ -1.11
RNU6-1048P-201ENST00000364054 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.06□□□□□ -1.12
RNU6-1048P-201ENST00000364054 HNRNPUL2Q1KMD3 747 aaKnown RBP8.06□□□□□ -1.12
RNU6-1048P-201ENST00000364054 SPINK5Q9NQ38 1064 aaPredicted RBP8.06□□□□□ -1.12
RNU6-1048P-201ENST00000364054 SLC4A2P04920 1241 aa8.01□□□□□ -1.13
RNU6-1048P-201ENST00000364054 TRHP20396 242 aaPredicted RBP8□□□□□ -1.13
RNU6-1048P-201ENST00000364054 DSG3P32926 999 aa7.99□□□□□ -1.13
RNU6-1048P-201ENST00000364054 SAMD1Q6SPF0 538 aaPredicted RBP7.96□□□□□ -1.14
RNU6-1048P-201ENST00000364054 ZNF219Q9P2Y4 722 aaPredicted RBP7.96□□□□□ -1.14
RNU6-1048P-201ENST00000364054 ABCB7O75027 752 aa7.93□□□□□ -1.14
RNU6-1048P-201ENST00000364054 SLC4A1APQ9BWU0 796 aaKnown RBP7.87□□□□□ -1.15
RNU6-1048P-201ENST00000364054 MYCNP04198 464 aaPredicted RBP7.86□□□□□ -1.15
RNU6-1048P-201ENST00000364054 FOXD4L1Q9NU39 408 aa7.77□□□□□ -1.17
RNU6-1048P-201ENST00000364054 POTEHQ6S545 545 aa7.74□□□□□ -1.17
RNU6-1048P-201ENST00000364054 POLA2Q14181 598 aa7.72□□□□□ -1.17
RNU6-1048P-201ENST00000364054 RBM42Q9BTD8 480 aaKnown RBP7.72□□□□□ -1.17
RNU6-1048P-201ENST00000364054 ZBTB12Q9Y330 459 aaPredicted RBP7.65□□□□□ -1.18
RNU6-1048P-201ENST00000364054 ATXN8OSP0DMR3 200 aa7.6□□□□□ -1.19
RNU6-1048P-201ENST00000364054 ATF5Q9Y2D1 282 aaPredicted RBP7.58□□□□□ -1.2
RNU6-1048P-201ENST00000364054 CHRDL2Q6WN34 429 aa7.53□□□□□ -1.2
RNU6-1048P-201ENST00000364054 ZBTB22O15209 634 aa7.52□□□□□ -1.21
RNU6-1048P-201ENST00000364054 OSCARQ8IYS5 282 aa7.5□□□□□ -1.21
RNU6-1048P-201ENST00000364054 AKT1S1Q96B36 256 aa7.49□□□□□ -1.21
RNU6-1048P-201ENST00000364054 FBLN2P98095 1184 aa7.44□□□□□ -1.22
RNU6-1048P-201ENST00000364054 REM2Q8IYK8 340 aaPredicted RBP7.41□□□□□ -1.22
RNU6-1048P-201ENST00000364054 PITPNM1O00562 1244 aa7.34□□□□□ -1.23
RNU6-1048P-201ENST00000364054 SPDYE2BA6NHP3 402 aa7.33□□□□□ -1.24
RNU6-1048P-201ENST00000364054 SPDYE6P0CI01 402 aa7.33□□□□□ -1.24
RNU6-1048P-201ENST00000364054 SPDYE2Q495Y8 402 aa7.33□□□□□ -1.24
RNU6-1048P-201ENST00000364054 PIP4P2Q8N4L2 257 aa7.32□□□□□ -1.24
RNU6-1048P-201ENST00000364054 HAX1O00165 279 aa7.27□□□□□ -1.25
RNU6-1048P-201ENST00000364054 ZNF692Q9BU19 519 aaPredicted RBP7.27□□□□□ -1.25
RNU6-1048P-201ENST00000364054 CLEC11AQ9Y240 323 aa7.27□□□□□ -1.25
RNU6-1048P-201ENST00000364054 CSRNP3Q8WYN3 585 aa7.25□□□□□ -1.25
RNU6-1048P-201ENST00000364054 FXR2P51116 673 aaKnown RBP eCLIP7.24□□□□□ -1.25
RNU6-1048P-201ENST00000364054 SPDYE1Q8NFV5 336 aaPredicted RBP7.24□□□□□ -1.25
RNU6-1048P-201ENST00000364054 SP7Q8TDD2 431 aaPredicted RBP7.24□□□□□ -1.25
RNU6-1048P-201ENST00000364054 MKRN4PQ13434 485 aaPredicted RBP7.23□□□□□ -1.25
RNU6-1048P-201ENST00000364054 EHMT2Q96KQ7 1210 aa7.21□□□□□ -1.26
RNU6-1048P-201ENST00000364054 PRKAR2AP13861 404 aaKnown RBP7.18□□□□□ -1.26
RNU6-1048P-201ENST00000364054 SSUH2Q9Y2M2 353 aa7.17□□□□□ -1.26
RNU6-1048P-201ENST00000364054 PABPN1Q86U42 306 aaKnown RBP eCLIP7.15□□□□□ -1.26
RNU6-1048P-201ENST00000364054 PRR29P0C7W0 189 aa7.12□□□□□ -1.27
RNU6-1048P-201ENST00000364054 CHADLQ6NUI6 762 aa7.07□□□□□ -1.28
RNU6-1048P-201ENST00000364054 EVX2Q03828 476 aa7.04□□□□□ -1.28
RNU6-1048P-201ENST00000364054 STAG3Q9UJ98 1225 aa7.04□□□□□ -1.28
RNU6-1048P-201ENST00000364054 C19orf67A6NJJ6 358 aa7.02□□□□□ -1.29
RNU6-1048P-201ENST00000364054 SPDYE4A6NLX3 237 aa6.98□□□□□ -1.29
RNU6-1048P-201ENST00000364054 CD44P16070 742 aaKnown RBP6.96□□□□□ -1.3
RNU6-1048P-201ENST00000364054 FARP1Q9Y4F1 1045 aaPredicted RBP6.96□□□□□ -1.3
RNU6-1048P-201ENST00000364054 GABBR2O75899 941 aa6.94□□□□□ -1.3
RNU6-1048P-201ENST00000364054 CLCN6P51797 869 aa6.91□□□□□ -1.3
RNU6-1048P-201ENST00000364054 PAK3O75914 559 aaPredicted RBP6.86□□□□□ -1.31
RNU6-1048P-201ENST00000364054 ZRANB1Q9UGI0 708 aa6.86□□□□□ -1.31
RNU6-1048P-201ENST00000364054 CREBZFQ9NS37 354 aa6.85□□□□□ -1.31
RNU6-1048P-201ENST00000364054 NPM1P06748 294 aaKnown RBP eCLIP6.84□□□□□ -1.31
RNU6-1048P-201ENST00000364054 DCBLD2Q96PD2 775 aa6.84□□□□□ -1.31
RNU6-1048P-201ENST00000364054 PLEKHG5O94827 1062 aa6.83□□□□□ -1.32
RNU6-1048P-201ENST00000364054 LHX8Q68G74 356 aa6.81□□□□□ -1.32
RNU6-1048P-201ENST00000364054 ZNF579Q8NAF0 562 aaKnown RBP6.8□□□□□ -1.32
RNU6-1048P-201ENST00000364054 PROM2Q8N271 834 aa6.76□□□□□ -1.33
RNU6-1048P-201ENST00000364054 PHF12Q96QT6 1004 aa6.75□□□□□ -1.33
RNU6-1048P-201ENST00000364054 GALR2O43603 387 aaPredicted RBP6.72□□□□□ -1.33
RNU6-1048P-201ENST00000364054 POTEIP0CG38 1075 aa6.72□□□□□ -1.33
RNU6-1048P-201ENST00000364054 ZBTB47Q9UFB7 747 aaPredicted RBP6.71□□□□□ -1.34
RNU6-1048P-201ENST00000364054 MIER1Q8N108 512 aa6.69□□□□□ -1.34
RNU6-1048P-201ENST00000364054 TSPYL2Q9H2G4 693 aaPredicted RBP6.69□□□□□ -1.34
RNU6-1048P-201ENST00000364054 MNX1P50219 401 aaPredicted RBP6.67□□□□□ -1.34
RNU6-1048P-201ENST00000364054 PLCD3Q8N3E9 789 aa6.66□□□□□ -1.34
RNU6-1048P-201ENST00000364054 FBXO3Q9UK99 471 aa6.65□□□□□ -1.34
RNU6-1048P-201ENST00000364054 FKBP8Q14318 412 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms