RNA–Protein interactions for RNA: ENST00000328945.6

SDR42E1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR42E1, Length 11,566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-201ENST00000328945 DCAF8L2P0C7V8 631 aa9.18□□□□□ -0.94
SDR42E1-201ENST00000328945 PELP1Q8IZL8 1130 aaKnown RBP8.87□□□□□ -0.99
SDR42E1-201ENST00000328945 MYT1Q01538 1121 aa8.86□□□□□ -0.99
SDR42E1-201ENST00000328945 NISCHQ9Y2I1 1504 aa8.71□□□□□ -1.02
SDR42E1-201ENST00000328945 CENPBP07199 599 aaPredicted RBP8.44□□□□□ -1.06
SDR42E1-201ENST00000328945 EHMT2Q96KQ7 1210 aa8.41□□□□□ -1.06
SDR42E1-201ENST00000328945 SUPT5HO00267 1087 aaKnown RBP8.38□□□□□ -1.07
SDR42E1-201ENST00000328945 ERICH6Q7L0X2 663 aa8.36□□□□□ -1.07
SDR42E1-201ENST00000328945 CCER1Q8TC90 406 aaPredicted RBP8.34□□□□□ -1.07
SDR42E1-201ENST00000328945 ZEB1P37275 1124 aaPredicted RBP8.32□□□□□ -1.08
SDR42E1-201ENST00000328945 SHROOM4Q9ULL8 1493 aa8.32□□□□□ -1.08
SDR42E1-201ENST00000328945 PCGF6Q9BYE7 350 aa8.26□□□□□ -1.09
SDR42E1-201ENST00000328945 FAM9AQ8IZU1 332 aaPredicted RBP8.23□□□□□ -1.09
SDR42E1-201ENST00000328945 TTBK1Q5TCY1 1321 aaPredicted RBP8.2□□□□□ -1.1
SDR42E1-201ENST00000328945 APLP2Q06481 763 aa8.15□□□□□ -1.11
SDR42E1-201ENST00000328945 NEFLP07196 543 aa8.11□□□□□ -1.11
SDR42E1-201ENST00000328945 HRCP23327 699 aa8.1□□□□□ -1.11
SDR42E1-201ENST00000328945 RANGAP1P46060 587 aaPredicted RBP8.08□□□□□ -1.12
SDR42E1-201ENST00000328945 YTHDC1Q96MU7 727 aaKnown RBP8.04□□□□□ -1.12
SDR42E1-201ENST00000328945 ATP1B4Q9UN42 357 aaPredicted RBP8.03□□□□□ -1.12
SDR42E1-201ENST00000328945 RTL5Q5HYW3 569 aaPredicted RBP7.89□□□□□ -1.15
SDR42E1-201ENST00000328945 TRIM26Q12899 539 aaPredicted RBP7.89□□□□□ -1.15
SDR42E1-201ENST00000328945 MYT1LQ9UL68 1186 aa7.89□□□□□ -1.15
SDR42E1-201ENST00000328945 DAXXQ9UER7 740 aaPredicted RBP7.87□□□□□ -1.15
SDR42E1-201ENST00000328945 CHIC1Q5VXU3 224 aa7.82□□□□□ -1.16
SDR42E1-201ENST00000328945 UBTFP17480 764 aaKnown RBP7.8□□□□□ -1.16
SDR42E1-201ENST00000328945 PPARGC1BQ86YN6 1023 aaKnown RBP7.78□□□□□ -1.16
SDR42E1-201ENST00000328945 GTF3C3Q9Y5Q9 886 aa7.77□□□□□ -1.17
SDR42E1-201ENST00000328945 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.75□□□□□ -1.17
SDR42E1-201ENST00000328945 HNRNPUL2Q1KMD3 747 aaKnown RBP7.75□□□□□ -1.17
SDR42E1-201ENST00000328945 DIEXFQ68CQ4 756 aaKnown RBP7.74□□□□□ -1.17
SDR42E1-201ENST00000328945 TRIM41Q8WV44 630 aa7.72□□□□□ -1.17
SDR42E1-201ENST00000328945 ZNF316A6NFI3 1004 aaPredicted RBP7.72□□□□□ -1.17
SDR42E1-201ENST00000328945 GLIPR1L2Q4G1C9 344 aa7.7□□□□□ -1.18
SDR42E1-201ENST00000328945 ACIN1Q9UKV3 1341 aaKnown RBP7.7□□□□□ -1.18
SDR42E1-201ENST00000328945 CLSPNQ9HAW4 1339 aa7.69□□□□□ -1.18
SDR42E1-201ENST00000328945 POLR3GLQ9BT43 218 aa7.68□□□□□ -1.18
SDR42E1-201ENST00000328945 SLC4A1APQ9BWU0 796 aaKnown RBP7.65□□□□□ -1.18
SDR42E1-201ENST00000328945 CCDC180Q9P1Z9 1646 aa7.62□□□□□ -1.19
SDR42E1-201ENST00000328945 ITGAEP38570 1179 aa7.61□□□□□ -1.19
SDR42E1-201ENST00000328945 CDK11AQ9UQ88 783 aaPredicted RBP7.6□□□□□ -1.19
SDR42E1-201ENST00000328945 EIF5BO60841 1220 aaKnown RBP7.59□□□□□ -1.19
SDR42E1-201ENST00000328945 CNGB1Q14028 1251 aaPredicted RBP7.59□□□□□ -1.19
SDR42E1-201ENST00000328945 BCANQ96GW7 911 aa7.57□□□□□ -1.2
SDR42E1-201ENST00000328945 ANP32AP39687 249 aaKnown RBP7.55□□□□□ -1.2
SDR42E1-201ENST00000328945 SCAF1Q9H7N4 1312 aaKnown RBP7.53□□□□□ -1.2
SDR42E1-201ENST00000328945 PABPN1Q86U42 306 aaKnown RBP eCLIP7.48□□□□□ -1.21
SDR42E1-201ENST00000328945 PLPPR3Q6T4P5 718 aa7.47□□□□□ -1.21
SDR42E1-201ENST00000328945 FBLN2P98095 1184 aa7.47□□□□□ -1.21
SDR42E1-201ENST00000328945 ANP32EQ9BTT0 268 aa7.47□□□□□ -1.21
SDR42E1-201ENST00000328945 LOC105371045A0A1W2PR82 267 aa7.46□□□□□ -1.22
SDR42E1-201ENST00000328945 BCL11AQ9H165 835 aa7.46□□□□□ -1.22
SDR42E1-201ENST00000328945 ABCC9O60706 1549 aa7.45□□□□□ -1.22
SDR42E1-201ENST00000328945 SLC24A1O60721 1099 aa7.43□□□□□ -1.22
SDR42E1-201ENST00000328945 NEUROD1Q13562 356 aa7.43□□□□□ -1.22
SDR42E1-201ENST00000328945 DCAF1Q9Y4B6 1507 aa7.42□□□□□ -1.22
SDR42E1-201ENST00000328945 ANP32CO43423 234 aa7.42□□□□□ -1.22
SDR42E1-201ENST00000328945 ANP32BQ92688 251 aaKnown RBP7.41□□□□□ -1.22
SDR42E1-201ENST00000328945 FAM50AQ14320 339 aaKnown RBP7.37□□□□□ -1.23
SDR42E1-201ENST00000328945 NBR1Q14596 966 aa7.37□□□□□ -1.23
SDR42E1-201ENST00000328945 FKBP8Q14318 412 aa7.36□□□□□ -1.23
SDR42E1-201ENST00000328945 KAT6BQ8WYB5 2073 aa7.36□□□□□ -1.23
SDR42E1-201ENST00000328945 TRIM52Q96A61 297 aa7.35□□□□□ -1.23
SDR42E1-201ENST00000328945 ZBTB47Q9UFB7 747 aaPredicted RBP7.35□□□□□ -1.23
SDR42E1-201ENST00000328945 NPM2Q86SE8 214 aaKnown RBP7.34□□□□□ -1.23
SDR42E1-201ENST00000328945 ZCCHC6Q5VYS8 1495 aaKnown RBP7.34□□□□□ -1.23
SDR42E1-201ENST00000328945 ZNF326Q5BKZ1 582 aaKnown RBP7.34□□□□□ -1.23
SDR42E1-201ENST00000328945 ESF1Q9H501 851 aaKnown RBP7.33□□□□□ -1.24
SDR42E1-201ENST00000328945 ARID3CA6NKF2 412 aa7.33□□□□□ -1.24
SDR42E1-201ENST00000328945 TNNT2P45379 298 aaPredicted RBP7.31□□□□□ -1.24
SDR42E1-201ENST00000328945 ERICH6BQ5W0A0 696 aa7.28□□□□□ -1.24
SDR42E1-201ENST00000328945 NEFMP07197 916 aa7.27□□□□□ -1.25
SDR42E1-201ENST00000328945 CANXP27824 592 aaKnown RBP7.26□□□□□ -1.25
SDR42E1-201ENST00000328945 UPF2Q9HAU5 1272 aaKnown RBP7.26□□□□□ -1.25
SDR42E1-201ENST00000328945 STAG3Q9UJ98 1225 aa7.26□□□□□ -1.25
SDR42E1-201ENST00000328945 A0A0G2JS52 829 aa7.26□□□□□ -1.25
SDR42E1-201ENST00000328945 MYO15BQ96JP2 1530 aa7.25□□□□□ -1.25
SDR42E1-201ENST00000328945 HSP90AA1P07900 732 aaKnown RBP7.23□□□□□ -1.25
SDR42E1-201ENST00000328945 DDRGK1Q96HY6 314 aa7.22□□□□□ -1.25
SDR42E1-201ENST00000328945 CCDC136Q96JN2 1154 aa7.22□□□□□ -1.25
SDR42E1-201ENST00000328945 ZNF777Q9ULD5 760 aaPredicted RBP7.22□□□□□ -1.25
SDR42E1-201ENST00000328945 P3H3Q8IVL6 736 aa7.21□□□□□ -1.25
SDR42E1-201ENST00000328945 CHGAP10645 457 aaKnown RBP7.2□□□□□ -1.26
SDR42E1-201ENST00000328945 PLEKHG5O94827 1062 aa7.2□□□□□ -1.26
SDR42E1-201ENST00000328945 HNRNPUQ00839 825 aaKnown RBP eCLIP7.2□□□□□ -1.26
SDR42E1-201ENST00000328945 NAP1L5Q96NT1 182 aaPredicted RBP7.2□□□□□ -1.26
SDR42E1-201ENST00000328945 TRIM44Q96DX7 344 aaPredicted RBP7.2□□□□□ -1.26
SDR42E1-201ENST00000328945 CDK11BP21127 795 aaKnown RBP7.2□□□□□ -1.26
SDR42E1-201ENST00000328945 NPM1P06748 294 aaKnown RBP eCLIP7.19□□□□□ -1.26
SDR42E1-201ENST00000328945 PPM1GO15355 546 aaPredicted RBP7.19□□□□□ -1.26
SDR42E1-201ENST00000328945 NOP58Q9Y2X3 529 aaKnown RBP7.19□□□□□ -1.26
SDR42E1-201ENST00000328945 NCLP19338 710 aaKnown RBP7.19□□□□□ -1.26
SDR42E1-201ENST00000328945 DEKP35659 375 aaKnown RBP7.19□□□□□ -1.26
SDR42E1-201ENST00000328945 RTN4Q9NQC3 1192 aaKnown RBP7.18□□□□□ -1.26
SDR42E1-201ENST00000328945 ARXQ96QS3 562 aa7.18□□□□□ -1.26
SDR42E1-201ENST00000328945 MIER1Q8N108 512 aa7.18□□□□□ -1.26
SDR42E1-201ENST00000328945 BECN1Q14457 450 aa7.16□□□□□ -1.26
SDR42E1-201ENST00000328945 SENP3Q9H4L4 574 aaPredicted RBP7.16□□□□□ -1.26
SDR42E1-201ENST00000328945 SCRIBQ14160 1630 aa7.15□□□□□ -1.26
SDR42E1-201ENST00000328945 SUPT16HQ9Y5B9 1047 aaKnown RBP7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms