RNA–Protein interactions for RNA: ENST00000414778.5

PCDH15-217, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCDH15, Length 9,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-217ENST00000414778 PELP1Q8IZL8 1130 aaKnown RBP8.65□□□□□ -1.03
PCDH15-217ENST00000414778 MYT1Q01538 1121 aa8.55□□□□□ -1.04
PCDH15-217ENST00000414778 SUPT5HO00267 1087 aaKnown RBP8.49□□□□□ -1.05
PCDH15-217ENST00000414778 DCAF8L2P0C7V8 631 aa8.39□□□□□ -1.07
PCDH15-217ENST00000414778 PCGF6Q9BYE7 350 aa8.39□□□□□ -1.07
PCDH15-217ENST00000414778 NISCHQ9Y2I1 1504 aa8.34□□□□□ -1.07
PCDH15-217ENST00000414778 CENPBP07199 599 aaPredicted RBP8.29□□□□□ -1.08
PCDH15-217ENST00000414778 ZEB1P37275 1124 aaPredicted RBP8.27□□□□□ -1.09
PCDH15-217ENST00000414778 HRCP23327 699 aa8.26□□□□□ -1.09
PCDH15-217ENST00000414778 SHROOM4Q9ULL8 1493 aa8.25□□□□□ -1.09
PCDH15-217ENST00000414778 EHMT2Q96KQ7 1210 aa8.14□□□□□ -1.11
PCDH15-217ENST00000414778 ERICH6Q7L0X2 663 aa8.14□□□□□ -1.11
PCDH15-217ENST00000414778 PPARGC1BQ86YN6 1023 aaKnown RBP8.07□□□□□ -1.12
PCDH15-217ENST00000414778 CCER1Q8TC90 406 aaPredicted RBP8.06□□□□□ -1.12
PCDH15-217ENST00000414778 YTHDC1Q96MU7 727 aaKnown RBP8.03□□□□□ -1.12
PCDH15-217ENST00000414778 TRIM26Q12899 539 aaPredicted RBP8.02□□□□□ -1.13
PCDH15-217ENST00000414778 FAM9AQ8IZU1 332 aaPredicted RBP7.98□□□□□ -1.13
PCDH15-217ENST00000414778 TTBK1Q5TCY1 1321 aaPredicted RBP7.94□□□□□ -1.14
PCDH15-217ENST00000414778 APLP2Q06481 763 aa7.91□□□□□ -1.14
PCDH15-217ENST00000414778 NEFLP07196 543 aa7.9□□□□□ -1.14
PCDH15-217ENST00000414778 GTF3C3Q9Y5Q9 886 aa7.87□□□□□ -1.15
PCDH15-217ENST00000414778 TRIM41Q8WV44 630 aa7.84□□□□□ -1.15
PCDH15-217ENST00000414778 DIEXFQ68CQ4 756 aaKnown RBP7.82□□□□□ -1.16
PCDH15-217ENST00000414778 ACIN1Q9UKV3 1341 aaKnown RBP7.8□□□□□ -1.16
PCDH15-217ENST00000414778 LOC105371045A0A1W2PR82 267 aa7.8□□□□□ -1.16
PCDH15-217ENST00000414778 CHIC1Q5VXU3 224 aa7.8□□□□□ -1.16
PCDH15-217ENST00000414778 SCAF1Q9H7N4 1312 aaKnown RBP7.73□□□□□ -1.17
PCDH15-217ENST00000414778 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.7□□□□□ -1.18
PCDH15-217ENST00000414778 UBTFP17480 764 aaKnown RBP7.65□□□□□ -1.19
PCDH15-217ENST00000414778 RTL5Q5HYW3 569 aaPredicted RBP7.65□□□□□ -1.19
PCDH15-217ENST00000414778 RANGAP1P46060 587 aaPredicted RBP7.63□□□□□ -1.19
PCDH15-217ENST00000414778 NEUROD1Q13562 356 aa7.63□□□□□ -1.19
PCDH15-217ENST00000414778 BCANQ96GW7 911 aa7.61□□□□□ -1.19
PCDH15-217ENST00000414778 ZNF316A6NFI3 1004 aaPredicted RBP7.6□□□□□ -1.19
PCDH15-217ENST00000414778 DAXXQ9UER7 740 aaPredicted RBP7.6□□□□□ -1.19
PCDH15-217ENST00000414778 HNRNPUL2Q1KMD3 747 aaKnown RBP7.58□□□□□ -1.2
PCDH15-217ENST00000414778 CDK11AQ9UQ88 783 aaPredicted RBP7.56□□□□□ -1.2
PCDH15-217ENST00000414778 CLSPNQ9HAW4 1339 aa7.53□□□□□ -1.2
PCDH15-217ENST00000414778 DCAF1Q9Y4B6 1507 aa7.51□□□□□ -1.21
PCDH15-217ENST00000414778 ANP32EQ9BTT0 268 aa7.5□□□□□ -1.21
PCDH15-217ENST00000414778 ATP1B4Q9UN42 357 aaPredicted RBP7.5□□□□□ -1.21
PCDH15-217ENST00000414778 MYT1LQ9UL68 1186 aa7.48□□□□□ -1.21
PCDH15-217ENST00000414778 ITGAEP38570 1179 aa7.46□□□□□ -1.21
PCDH15-217ENST00000414778 BCL11AQ9H165 835 aa7.46□□□□□ -1.22
PCDH15-217ENST00000414778 FKBP8Q14318 412 aa7.45□□□□□ -1.22
PCDH15-217ENST00000414778 EIF5BO60841 1220 aaKnown RBP7.44□□□□□ -1.22
PCDH15-217ENST00000414778 ANP32CO43423 234 aa7.42□□□□□ -1.22
PCDH15-217ENST00000414778 ANP32AP39687 249 aaKnown RBP7.4□□□□□ -1.23
PCDH15-217ENST00000414778 POLR3GLQ9BT43 218 aa7.39□□□□□ -1.23
PCDH15-217ENST00000414778 MIER1Q8N108 512 aa7.38□□□□□ -1.23
PCDH15-217ENST00000414778 GLIPR1L2Q4G1C9 344 aa7.37□□□□□ -1.23
PCDH15-217ENST00000414778 CNGB1Q14028 1251 aaPredicted RBP7.37□□□□□ -1.23
PCDH15-217ENST00000414778 NBR1Q14596 966 aa7.35□□□□□ -1.23
PCDH15-217ENST00000414778 MYO15BQ96JP2 1530 aa7.33□□□□□ -1.24
PCDH15-217ENST00000414778 NPM2Q86SE8 214 aaKnown RBP7.32□□□□□ -1.24
PCDH15-217ENST00000414778 ZBTB47Q9UFB7 747 aaPredicted RBP7.3□□□□□ -1.24
PCDH15-217ENST00000414778 CCDC180Q9P1Z9 1646 aa7.3□□□□□ -1.24
PCDH15-217ENST00000414778 SUPT16HQ9Y5B9 1047 aaKnown RBP7.28□□□□□ -1.24
PCDH15-217ENST00000414778 CSRNP3Q8WYN3 585 aa7.25□□□□□ -1.25
PCDH15-217ENST00000414778 FAM50AQ14320 339 aaKnown RBP7.25□□□□□ -1.25
PCDH15-217ENST00000414778 HNRNPUQ00839 825 aaKnown RBP eCLIP7.24□□□□□ -1.25
PCDH15-217ENST00000414778 DDX10Q13206 875 aaKnown RBP7.24□□□□□ -1.25
PCDH15-217ENST00000414778 TRIM52Q96A61 297 aa7.23□□□□□ -1.25
PCDH15-217ENST00000414778 DEKP35659 375 aaKnown RBP7.21□□□□□ -1.26
PCDH15-217ENST00000414778 IRX6P78412 446 aaPredicted RBP7.2□□□□□ -1.26
PCDH15-217ENST00000414778 RTN4Q9NQC3 1192 aaKnown RBP7.2□□□□□ -1.26
PCDH15-217ENST00000414778 TSHZ2Q9NRE2 1034 aa7.2□□□□□ -1.26
PCDH15-217ENST00000414778 RBM19Q9Y4C8 960 aaKnown RBP7.19□□□□□ -1.26
PCDH15-217ENST00000414778 CCDC136Q96JN2 1154 aa7.18□□□□□ -1.26
PCDH15-217ENST00000414778 NOP58Q9Y2X3 529 aaKnown RBP7.16□□□□□ -1.26
PCDH15-217ENST00000414778 FAM9BQ8IZU0 186 aa7.16□□□□□ -1.26
PCDH15-217ENST00000414778 ANP32BQ92688 251 aaKnown RBP7.14□□□□□ -1.27
PCDH15-217ENST00000414778 DDRGK1Q96HY6 314 aa7.13□□□□□ -1.27
PCDH15-217ENST00000414778 PPM1GO15355 546 aaPredicted RBP7.13□□□□□ -1.27
PCDH15-217ENST00000414778 NEFMP07197 916 aa7.12□□□□□ -1.27
PCDH15-217ENST00000414778 ERICH6BQ5W0A0 696 aa7.11□□□□□ -1.27
PCDH15-217ENST00000414778 PPP4R2Q9NY27 417 aa7.11□□□□□ -1.27
PCDH15-217ENST00000414778 ARXQ96QS3 562 aa7.1□□□□□ -1.27
PCDH15-217ENST00000414778 CANXP27824 592 aaKnown RBP7.09□□□□□ -1.27
PCDH15-217ENST00000414778 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.08□□□□□ -1.28
PCDH15-217ENST00000414778 TONSLQ96HA7 1378 aa7.08□□□□□ -1.28
PCDH15-217ENST00000414778 UPF2Q9HAU5 1272 aaKnown RBP7.08□□□□□ -1.28
PCDH15-217ENST00000414778 NAP1L5Q96NT1 182 aaPredicted RBP7.08□□□□□ -1.28
PCDH15-217ENST00000414778 LAS1LQ9Y4W2 734 aaKnown RBP7.08□□□□□ -1.28
PCDH15-217ENST00000414778 ZNF326Q5BKZ1 582 aaKnown RBP7.07□□□□□ -1.28
PCDH15-217ENST00000414778 SLC4A1APQ9BWU0 796 aaKnown RBP7.06□□□□□ -1.28
PCDH15-217ENST00000414778 MRS2Q9HD23 443 aa7.06□□□□□ -1.28
PCDH15-217ENST00000414778 HIRIP3Q9BW71 556 aaPredicted RBP7.06□□□□□ -1.28
PCDH15-217ENST00000414778 TRIM44Q96DX7 344 aaPredicted RBP7.05□□□□□ -1.28
PCDH15-217ENST00000414778 SALL2Q9Y467 1007 aaPredicted RBP7.04□□□□□ -1.28
PCDH15-217ENST00000414778 B4GALNT3Q6L9W6 998 aa7.03□□□□□ -1.28
PCDH15-217ENST00000414778 TMC1Q8TDI8 760 aa7.03□□□□□ -1.28
PCDH15-217ENST00000414778 HSP90AA1P07900 732 aaKnown RBP7.03□□□□□ -1.28
PCDH15-217ENST00000414778 TNNT2P45379 298 aaPredicted RBP7.02□□□□□ -1.29
PCDH15-217ENST00000414778 BECN1Q14457 450 aa7.02□□□□□ -1.29
PCDH15-217ENST00000414778 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.02□□□□□ -1.29
PCDH15-217ENST00000414778 PRKCSHP14314 528 aaPredicted RBP7.01□□□□□ -1.29
PCDH15-217ENST00000414778 CCER2I3L3R5 266 aa6.99□□□□□ -1.29
PCDH15-217ENST00000414778 ZCCHC6Q5VYS8 1495 aaKnown RBP6.97□□□□□ -1.29
PCDH15-217ENST00000414778 CEP162Q5TB80 1403 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms