RNA–Protein interactions for RNA: ENST00000614895.4

PCDH15-227, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCDH15, Length 9,249 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-227ENST00000614895 MYT1Q01538 1121 aa8.74□□□□□ -1.01
PCDH15-227ENST00000614895 PELP1Q8IZL8 1130 aaKnown RBP8.65□□□□□ -1.03
PCDH15-227ENST00000614895 SUPT5HO00267 1087 aaKnown RBP8.49□□□□□ -1.05
PCDH15-227ENST00000614895 DCAF8L2P0C7V8 631 aa8.39□□□□□ -1.07
PCDH15-227ENST00000614895 PCGF6Q9BYE7 350 aa8.39□□□□□ -1.07
PCDH15-227ENST00000614895 NISCHQ9Y2I1 1504 aa8.34□□□□□ -1.07
PCDH15-227ENST00000614895 CENPBP07199 599 aaPredicted RBP8.29□□□□□ -1.08
PCDH15-227ENST00000614895 ZEB1P37275 1124 aaPredicted RBP8.27□□□□□ -1.09
PCDH15-227ENST00000614895 HRCP23327 699 aa8.26□□□□□ -1.09
PCDH15-227ENST00000614895 TTBK1Q5TCY1 1321 aaPredicted RBP8.26□□□□□ -1.09
PCDH15-227ENST00000614895 SHROOM4Q9ULL8 1493 aa8.25□□□□□ -1.09
PCDH15-227ENST00000614895 EHMT2Q96KQ7 1210 aa8.14□□□□□ -1.11
PCDH15-227ENST00000614895 ERICH6Q7L0X2 663 aa8.14□□□□□ -1.11
PCDH15-227ENST00000614895 PPARGC1BQ86YN6 1023 aaKnown RBP8.07□□□□□ -1.12
PCDH15-227ENST00000614895 CCER1Q8TC90 406 aaPredicted RBP8.06□□□□□ -1.12
PCDH15-227ENST00000614895 YTHDC1Q96MU7 727 aaKnown RBP8.03□□□□□ -1.12
PCDH15-227ENST00000614895 TRIM26Q12899 539 aaPredicted RBP8.02□□□□□ -1.13
PCDH15-227ENST00000614895 RANGAP1P46060 587 aaPredicted RBP8.01□□□□□ -1.13
PCDH15-227ENST00000614895 FAM9AQ8IZU1 332 aaPredicted RBP7.98□□□□□ -1.13
PCDH15-227ENST00000614895 APLP2Q06481 763 aa7.91□□□□□ -1.14
PCDH15-227ENST00000614895 NEFLP07196 543 aa7.9□□□□□ -1.14
PCDH15-227ENST00000614895 GTF3C3Q9Y5Q9 886 aa7.87□□□□□ -1.15
PCDH15-227ENST00000614895 TRIM41Q8WV44 630 aa7.84□□□□□ -1.15
PCDH15-227ENST00000614895 DIEXFQ68CQ4 756 aaKnown RBP7.82□□□□□ -1.16
PCDH15-227ENST00000614895 ACIN1Q9UKV3 1341 aaKnown RBP7.8□□□□□ -1.16
PCDH15-227ENST00000614895 LOC105371045A0A1W2PR82 267 aa7.8□□□□□ -1.16
PCDH15-227ENST00000614895 CHIC1Q5VXU3 224 aa7.8□□□□□ -1.16
PCDH15-227ENST00000614895 SCAF1Q9H7N4 1312 aaKnown RBP7.73□□□□□ -1.17
PCDH15-227ENST00000614895 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.7□□□□□ -1.18
PCDH15-227ENST00000614895 UBTFP17480 764 aaKnown RBP7.65□□□□□ -1.19
PCDH15-227ENST00000614895 RTL5Q5HYW3 569 aaPredicted RBP7.65□□□□□ -1.19
PCDH15-227ENST00000614895 NEUROD1Q13562 356 aa7.63□□□□□ -1.19
PCDH15-227ENST00000614895 BCANQ96GW7 911 aa7.61□□□□□ -1.19
PCDH15-227ENST00000614895 ZNF316A6NFI3 1004 aaPredicted RBP7.6□□□□□ -1.19
PCDH15-227ENST00000614895 DAXXQ9UER7 740 aaPredicted RBP7.6□□□□□ -1.19
PCDH15-227ENST00000614895 SLC24A1O60721 1099 aa7.58□□□□□ -1.2
PCDH15-227ENST00000614895 HNRNPUL2Q1KMD3 747 aaKnown RBP7.58□□□□□ -1.2
PCDH15-227ENST00000614895 GLIPR1L2Q4G1C9 344 aa7.57□□□□□ -1.2
PCDH15-227ENST00000614895 CDK11AQ9UQ88 783 aaPredicted RBP7.56□□□□□ -1.2
PCDH15-227ENST00000614895 CLSPNQ9HAW4 1339 aa7.53□□□□□ -1.2
PCDH15-227ENST00000614895 DCAF1Q9Y4B6 1507 aa7.51□□□□□ -1.21
PCDH15-227ENST00000614895 ANP32EQ9BTT0 268 aa7.5□□□□□ -1.21
PCDH15-227ENST00000614895 ATP1B4Q9UN42 357 aaPredicted RBP7.5□□□□□ -1.21
PCDH15-227ENST00000614895 MYT1LQ9UL68 1186 aa7.48□□□□□ -1.21
PCDH15-227ENST00000614895 ITGAEP38570 1179 aa7.46□□□□□ -1.21
PCDH15-227ENST00000614895 BCL11AQ9H165 835 aa7.46□□□□□ -1.22
PCDH15-227ENST00000614895 FKBP8Q14318 412 aa7.45□□□□□ -1.22
PCDH15-227ENST00000614895 EIF5BO60841 1220 aaKnown RBP7.44□□□□□ -1.22
PCDH15-227ENST00000614895 ANP32CO43423 234 aa7.42□□□□□ -1.22
PCDH15-227ENST00000614895 ANP32AP39687 249 aaKnown RBP7.4□□□□□ -1.23
PCDH15-227ENST00000614895 POLR3GLQ9BT43 218 aa7.39□□□□□ -1.23
PCDH15-227ENST00000614895 MIER1Q8N108 512 aa7.38□□□□□ -1.23
PCDH15-227ENST00000614895 CNGB1Q14028 1251 aaPredicted RBP7.37□□□□□ -1.23
PCDH15-227ENST00000614895 NBR1Q14596 966 aa7.35□□□□□ -1.23
PCDH15-227ENST00000614895 MYO15BQ96JP2 1530 aa7.33□□□□□ -1.24
PCDH15-227ENST00000614895 NPM2Q86SE8 214 aaKnown RBP7.32□□□□□ -1.24
PCDH15-227ENST00000614895 ZBTB47Q9UFB7 747 aaPredicted RBP7.3□□□□□ -1.24
PCDH15-227ENST00000614895 CCDC180Q9P1Z9 1646 aa7.3□□□□□ -1.24
PCDH15-227ENST00000614895 SUPT16HQ9Y5B9 1047 aaKnown RBP7.28□□□□□ -1.24
PCDH15-227ENST00000614895 CSRNP3Q8WYN3 585 aa7.25□□□□□ -1.25
PCDH15-227ENST00000614895 FAM50AQ14320 339 aaKnown RBP7.25□□□□□ -1.25
PCDH15-227ENST00000614895 HNRNPUQ00839 825 aaKnown RBP eCLIP7.24□□□□□ -1.25
PCDH15-227ENST00000614895 DDX10Q13206 875 aaKnown RBP7.24□□□□□ -1.25
PCDH15-227ENST00000614895 TRIM52Q96A61 297 aa7.23□□□□□ -1.25
PCDH15-227ENST00000614895 DEKP35659 375 aaKnown RBP7.21□□□□□ -1.26
PCDH15-227ENST00000614895 IRX6P78412 446 aaPredicted RBP7.2□□□□□ -1.26
PCDH15-227ENST00000614895 RTN4Q9NQC3 1192 aaKnown RBP7.2□□□□□ -1.26
PCDH15-227ENST00000614895 TSHZ2Q9NRE2 1034 aa7.2□□□□□ -1.26
PCDH15-227ENST00000614895 RBM19Q9Y4C8 960 aaKnown RBP7.19□□□□□ -1.26
PCDH15-227ENST00000614895 CCDC136Q96JN2 1154 aa7.18□□□□□ -1.26
PCDH15-227ENST00000614895 KAT6BQ8WYB5 2073 aa7.17□□□□□ -1.26
PCDH15-227ENST00000614895 NOP58Q9Y2X3 529 aaKnown RBP7.16□□□□□ -1.26
PCDH15-227ENST00000614895 FAM9BQ8IZU0 186 aa7.16□□□□□ -1.26
PCDH15-227ENST00000614895 ANP32BQ92688 251 aaKnown RBP7.14□□□□□ -1.27
PCDH15-227ENST00000614895 DDRGK1Q96HY6 314 aa7.13□□□□□ -1.27
PCDH15-227ENST00000614895 PPM1GO15355 546 aaPredicted RBP7.13□□□□□ -1.27
PCDH15-227ENST00000614895 NEFMP07197 916 aa7.12□□□□□ -1.27
PCDH15-227ENST00000614895 ERICH6BQ5W0A0 696 aa7.11□□□□□ -1.27
PCDH15-227ENST00000614895 PPP4R2Q9NY27 417 aa7.11□□□□□ -1.27
PCDH15-227ENST00000614895 ARXQ96QS3 562 aa7.1□□□□□ -1.27
PCDH15-227ENST00000614895 CANXP27824 592 aaKnown RBP7.09□□□□□ -1.27
PCDH15-227ENST00000614895 TNNT2P45379 298 aaPredicted RBP7.09□□□□□ -1.27
PCDH15-227ENST00000614895 NCLP19338 710 aaKnown RBP7.09□□□□□ -1.27
PCDH15-227ENST00000614895 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.08□□□□□ -1.28
PCDH15-227ENST00000614895 TONSLQ96HA7 1378 aa7.08□□□□□ -1.28
PCDH15-227ENST00000614895 UPF2Q9HAU5 1272 aaKnown RBP7.08□□□□□ -1.28
PCDH15-227ENST00000614895 NAP1L5Q96NT1 182 aaPredicted RBP7.08□□□□□ -1.28
PCDH15-227ENST00000614895 LAS1LQ9Y4W2 734 aaKnown RBP7.08□□□□□ -1.28
PCDH15-227ENST00000614895 ZNF326Q5BKZ1 582 aaKnown RBP7.07□□□□□ -1.28
PCDH15-227ENST00000614895 SLC4A1APQ9BWU0 796 aaKnown RBP7.06□□□□□ -1.28
PCDH15-227ENST00000614895 MRS2Q9HD23 443 aa7.06□□□□□ -1.28
PCDH15-227ENST00000614895 HIRIP3Q9BW71 556 aaPredicted RBP7.06□□□□□ -1.28
PCDH15-227ENST00000614895 TRIM44Q96DX7 344 aaPredicted RBP7.05□□□□□ -1.28
PCDH15-227ENST00000614895 SALL2Q9Y467 1007 aaPredicted RBP7.04□□□□□ -1.28
PCDH15-227ENST00000614895 B4GALNT3Q6L9W6 998 aa7.03□□□□□ -1.28
PCDH15-227ENST00000614895 TMC1Q8TDI8 760 aa7.03□□□□□ -1.28
PCDH15-227ENST00000614895 HSP90AA1P07900 732 aaKnown RBP7.03□□□□□ -1.28
PCDH15-227ENST00000614895 BECN1Q14457 450 aa7.02□□□□□ -1.29
PCDH15-227ENST00000614895 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.02□□□□□ -1.29
PCDH15-227ENST00000614895 PRKCSHP14314 528 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms